rbis (cssa29h8orf59)


Basic Information

Item Value
gene id rbis
gene name cssa29h8orf59
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 24968304 ~ 24976522 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021562819.2
TTCAGCACGGATAGCGTTGAAATCGAGCGCATCATGGGGGCGTTTCAATCTGTTGTCCTCAGGAGCACTGATTGGTTCAGAATTTAAGTCGCATCTAAATTGCGTCAAGCTCCGTTGCTTCAACACGTTTTACATTTGCTGATAGTCGTCCACTTCTTGAGGTAATCATGGCGAAGAATAAACAAAAAGGCAAAAAGCAGCAGAATGTTTTCCGAGTGACCAacaaacagacaaaacaaaagaaTAAGGCAAAACCTGTCACTTCAACTCTCAAACACATCAATAAAGTGAAGAATGAGAAGGTGGAGAACCTGAATAAAATATTTACAGAGGTCCAACTGGATGTCAGAAGTGTATCAAAATGCACTGCTCCGGTGCCCAGAAAGCCAACACCGGTTGTCCGTGAAGCACCGAAAGAGTCTGCGAATGTGGACGGCGCTGCCCAGTTGTTCTCTCAGCTATAGTGCGGATTGGCTGCATGAAATGAAATCTAGTTACAATTCGAACAGTCCACACTGCCCCAATAACTTGTGTAGAATGTAATATGACTATCATGATGACGATATGTAAATATGgtgatatatttttaaaaaagtgTGCAGATATTCGAAGAATGTAAAGGATTAATTTGTTGAGAGGTTGACACATGCTGTAAAATGATAGATTCCCCGTTGGACACATCTGCCAAATATAATGATCAACAACCTTAAGGTGTCTGTTGCATGTATCTATGCTGATATTGATCTCTCTCCACAAGACTATGCTGCCAATGCTGAATGTCAGGGTCTTAGTGCCACACAATATTAAATATTTGTAGGTAGTTTTTATTGGATTTTATGAGATATTGTACTAATTATTAAGTTGTTCTTGGATAATCTACTGAATGATGCGTGGGTCTATTAGTAAATCACTCGTTCTTCTCCTTTTTAAAAAAACTTTGGGAGAACTACATCTCGGCGCAGCTTGCTGGCAGTGGCTGGTTTTATGTATGCTGGGCACATTCAGCGGTAGCCAGTTGGTGGTGCTTTACTGATGTGCTCCTGATTGCCTGTCTCTGTGGACAGACACCTGTGTGGAGGCTGTATTTATTCAGTCAGTAAGCATGGGGCTGTCACAAGACATACGTGTGCCTGGGAAATGCTGCAACTGAGATTACATTCGCATTTTACAGCTTGTAACATGCTTCTTTCTGTAAGCTGTTTTTCTGGAGGTGGTTATTGGTGAAATGATATGTAATGGCAGATGTTCAATATCATATTTTATATCCTGCGTTTCCAATCTCATTAGTCTTTTCAAGGCTTTAATTGTAAAAGTGTCACCACTTAGAATTTAGGTGCGAAGTAGAATATTCCtgaaatacaccccccccccccccccacaaccacACTCCCAAAAAACTGACTGGTATGAGGTGAGTGGAACAGTGATACATGTTCTGAGCTTAGCTTAAACACTTTTCTGAACATTTAAATGAAGCTAAGGTGCCAGGACATTACATTTTCAGTGTAGGCCGGTATACATGCATTTGTGAGAGTGTAGCTGTTGTATTTAATACGGCAGAGGAAATGGTTCTCTTGGTTCTGAATGATTGGACACTGGGGTTAGTGTGACAGCTGCTACAGTGTAGAGGTTTCAGACTGGCCTTGGAGCCAGGTACATCCCATTGAGATTCCAGATGGAATAGCTGGAGACAGCAGGGTGGCACCATAATACCCTGGGGGAAGAGAATACATATCACACATGCATTTATATAGGACTGAAAAACACGATCACGCACACTATTACATTGACTTATGCAGTAGAAACCCTCCATCCAGCCACACTACAAAGCACAGTGTGAGTTTTATCTACACCCCACTAGGGTGAGAAAATCTCATGGGCGAAAGGGTTGTGCGGTAGCACAGGACATTGTACCTGGCCTGTCAATTCCGTTTCCACAGTAGGTGGCATCATTTCAAGCATGACTTGCTCTTCAAAAGGGGTCCTCGTGACAGGACCATAAAGTGGCAGAGAATTTTCGAAGAAAAAAGATTGTCTGAGTAAGATGGTCGCTGTCCACTGCCTGTTGGTGCTGAACCTCGAAATGGCGCTATTGATGCTATCAGTGGATCTAAAATAGCATGATTATTATATCGCTCATTCTACACATATCAATGTCACCATGACAGATGCAGTTTTTGACAACATGCCAGTATATCTTGAGTCGGCTTCCTTGATTCTGCTGTGGTACATTGTTCAAATTAACTTCTAAATTTGTGAAGTACAACAAATGTAGTTTGGCCTAGGATGTTATTTAGAGACTCATCAATTCTGCCCACTCAAAAAAGTTATATGAAGGCTATTACCTTTTTTTCCCGGCTTATTGCTGAAATGGCTGACAATACAAACTGCACAGTGCATTTTTAGAtgcagatacagtatatcaccatAAAGTTAGCAGCTCAAAGCTTGAGATAATAAAAGTTACATTGAAAAGTATTGACTTAATCAACTATAAAGACAATTGCTTCTGAA
>TU1453808
CAAGCTCCGTTGCTTCAACACGTTTTACATTTGCTGATAGTCGTCCACTTCTTGAGGTAATCATGGCGAAGAATAAACAAAAAGGCAAAAAGCAGCAGAATGTTTTCCGAGTGACCAacaaacagacaaaacaaaagaaTAAGGCAAAACCTGTCACTTCAACTCTCAAACACATCAATAAAGTGAAGAATGAGAAGGTGGAGAACCTGAATAAAATATTTACAGAGGTCCAACTGGATGTCAGAAGTGTATCAAAATGCACTGCTCCGGTGCCCAGAAAGCCAACACCGGTTGTCCGTGAAGCACCGAAAGAGTCTGCGAATGTGGACGGCGCTGCCCAGTTGTTCTCTCAGCTATAGTGCGGATTGGCTGCATGAAATGAAATCTAGTTACAATTCGAACAGTCCACACTGCCCCAATAACTTGTGTAGAATGTAATATGACTATCATGATGACGATATGTAAATATGgtgatatatttttaaaaaagtgTGCAGATATTCGAAGAATGTAAAGGATTAATTTGTTGAGAGGTTGACACATGCTGTAAAATGATAGATTCCCCGTTGGACACATCTGCCAAATATAATGATCAACAAC

Function

NR:

description
uncharacterized protein C8orf59 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021562819.2 False 2514 mRNA 0.41 4 24968304 24976522
TU1453808 True 600 TUCP 0.40 4 24968409 24974713

Neighbor

gene id symbol gene type direction distance location
LOC110489866 tmem241 coding upstream 91580 24869606 ~ 24876724 (+)
LOC110489863 sdcbp coding upstream 127341 24836607 ~ 24840963 (+)
LOC110489862 fam110b coding upstream 138369 24826608 ~ 24829935 (+)
chchd7 chch7 coding upstream 205341 24759852 ~ 24762965 (+)
LOC110489855 arhgap21 coding upstream 236811 24625469 ~ 24731493 (+)
zgc:111976 LOC106590202 coding downstream 676216 25652738 ~ 25662668 (+)
LOC110489875 LOC106590201 coding downstream 689201 25665723 ~ 25703391 (+)
LOC118938912 NA coding downstream 830152 25806674 ~ 25820021 (+)
LOC118938913 NA coding downstream 875298 25851820 ~ 25853297 (+)
LOC110489881 LOC106590196 coding downstream 958655 25935177 ~ 26048644 (+)
G1272702 NA non-coding upstream 48510 24919563 ~ 24919794 (+)
G1272701 NA non-coding upstream 48903 24919182 ~ 24919401 (+)
G1272698 NA non-coding upstream 51007 24917029 ~ 24917297 (+)
G1272694 NA non-coding upstream 57216 24910849 ~ 24911088 (+)
G1272688 NA non-coding upstream 65312 24902708 ~ 24902992 (+)
G1272812 NA non-coding downstream 129233 25105755 ~ 25106041 (+)
G1272813 NA non-coding downstream 130038 25106560 ~ 25106872 (+)
G1272819 NA non-coding downstream 136494 25113016 ~ 25113243 (+)
G1272835 NA non-coding downstream 157971 25134493 ~ 25134699 (+)
G1272846 NA non-coding downstream 171034 25147556 ~ 25147786 (+)
G1272672 LOC106590208 other upstream 5263 24959932 ~ 25027501 (+)
G1272573 NA other upstream 224499 24741879 ~ 24787896 (+)
G1272220 LOC106590226 other upstream 564643 24388412 ~ 24403661 (+)
G1274765 NA other downstream 1387756 26364278 ~ 26365146 (+)
G1274830 NA other downstream 1463489 26440011 ~ 26442387 (+)
kif9 kif9 other downstream 1984269 26960749 ~ 26974049 (+)
G1275572 NA other downstream 2124787 27101309 ~ 27102027 (+)
G1276288 NA other downstream 2877096 27853618 ~ 27854013 (+)

Expression


Co-expression Network