Gene
RNA
| Item | Value |
|---|---|
| gene id | trnaa-ugc-65 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 26124741 ~ 26124814 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Deoxyribonuclease gamma precursor |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnaa-ugc-65 | True | 74 | mRNA | 0.58 | 1 | 26124741 | 26124814 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cdh19 | LOC106590195 | coding | downstream | 10282 | 26092332 ~ 26114459 (-) |
| LOC110489880 | LOC106590197 | coding | downstream | 323489 | 25786208 ~ 25801252 (-) |
| LOC110489878 | LOC106590198 | coding | downstream | 349800 | 25770924 ~ 25774941 (-) |
| LOC110489879 | LOC106590199 | coding | downstream | 355705 | 25746689 ~ 25769036 (-) |
| LOC110489876 | LOC106590200 | coding | downstream | 387863 | 25717772 ~ 25736878 (-) |
| LOC110489883 | LOC106590194 | coding | upstream | 122328 | 26247142 ~ 26252430 (-) |
| LOC110489884 | tmx3 | coding | upstream | 315181 | 26439995 ~ 26506930 (-) |
| pxdc1b | pxdc1 | coding | upstream | 388865 | 26513679 ~ 26528616 (-) |
| LOC110489888 | gli3 | coding | upstream | 441537 | 26566351 ~ 26694581 (-) |
| LOC110489889 | LOC106590189 | coding | upstream | 594973 | 26719787 ~ 26723716 (-) |
| G1274568 | NA | non-coding | downstream | 9666 | 26114874 ~ 26115075 (-) |
| G1274561 | NA | non-coding | downstream | 34304 | 26090043 ~ 26090437 (-) |
| G1274548 | NA | non-coding | downstream | 58509 | 26065954 ~ 26066232 (-) |
| G1274532 | LOC106590196 | non-coding | downstream | 76142 | 26046058 ~ 26048599 (-) |
| G1274529 | NA | non-coding | downstream | 81653 | 26042849 ~ 26043088 (-) |
| G1274595 | NA | non-coding | upstream | 46356 | 26171170 ~ 26177357 (-) |
| G1274596 | NA | non-coding | upstream | 48056 | 26172870 ~ 26179247 (-) |
| G1274648 | NA | non-coding | upstream | 116648 | 26241462 ~ 26241722 (-) |
| G1274649 | NA | non-coding | upstream | 117737 | 26242551 ~ 26242767 (-) |
| G1274620 | NA | non-coding | upstream | 119239 | 26244053 ~ 26245184 (-) |
| G1271421 | NA | other | downstream | 2395802 | 23713355 ~ 23728939 (-) |
| G1269265 | NA | other | downstream | 4321389 | 21802687 ~ 21803352 (-) |
| G1268555 | LOC106590243 | other | downstream | 5164652 | 20958372 ~ 20960089 (-) |
| G1267452 | NA | other | downstream | 5834068 | 20290350 ~ 20290673 (-) |
| G1275015 | NA | other | upstream | 386711 | 26511525 ~ 26512075 (-) |
| G1275016 | LOC106590191 | other | upstream | 430154 | 26554968 ~ 26562033 (-) |
| LOC110489892 | NA | other | upstream | 609399 | 26733490 ~ 26743932 (-) |
| G1275434 | LOC106590185 | other | upstream | 712506 | 26837320 ~ 26841026 (-) |
