emilin2b (LOC106590142)


Basic Information

Item Value
gene id emilin2b
gene name LOC106590142
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 28316887 ~ 28335821 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021562958.2
TGTGCGCCAACTCGTTTTTTATTCGGTTAAATTTACGTCTAAAATGACACTCAATCAAATGTATCTATAACACTATGATCTCATTTCAATGCACACTCAATCATTTGGCATATTCTAAAAAGTGTCTTTAGGTTTTGTTCGAAGTTTTATATGAGTAGTACTTTAGTCAGTGTCCCCGCCGATCTGAAGGTGATGGTCATATGACACCCGCATATCAATAAAACATGTTTGCTACAAGATGTATCACTTACAATAAAGTGATGCTAGTCTGACACTCTCACATGTTTGCAAAGCGGGGGGTCCAGAACCGAGTTTGGGAAAACCTGGTGTAAAGCACTGTATTGCATTATCCAGTGGGCTGGATATGAAAGCGTTCCTTTGGGGACTTCGTCACTAGAGTTGCATGCATGCAGTCAACCACATTCAAGTATTTTTCAAGAAAGCAGGGAACATGATCTCCGATACAAACTGAAGCAGATGAGTGAGGAAACTACGAAACGGGATTTAATCACTGTTCTACTGGGAGCGCATTTTACTCTCTGGGAGTGAGGAGCACTGGTGAAGGGGGTTCGCTGTACCCCGAACGTCACGTCACAGGCTGCTATACCCTGGAAGAAAGTTTGTATTATCAGCCTTTCGAGTTGCTGCTAGGAGAGGGACCAAAACGTCTAACCTCAATGCTTACATGTTTAATATTTGTCTACTTTTTTCCGTTGTATTAAAATGAAGTGCCTTCCCACCGGATTCGTCTTAAAAAGTGCCTTATTTCCCTTATTGCTCACCTTTCCATTGATCAATGGAACGCCGTCACGGTATAACATGTTCCAGGGAAGCGCATACTCTGGCTCAGAACAACGACAGAGGAATAAAAACTGGTGTGCATACGTCGTGCAGAAGAACGTGAGCTATGCGGTCGTGGGTGGCACCGAGAGCTTTGTGCAGCCGGAGTCTGCGCCTTGCCAGATGCATCAACTCAACTGCGCGCAACAAGTGATGTATCGAACCCAATTCCGCCCCATGTATAAGGTTGGCTATaagctggtgacagagctggagtGGAGGTGCTGTCCAGGGTACCAGGGTCATGACTGCAAAGATCTGAAAGGTGTCCCGTTCCGTCAGACAGTCCTGGGGCCTCGGTCCAACCCGCCTCCTGCCCCTGGACACATCGCAGAGACACAGGGTCCGGGGCAGCAGGCGTGGGGTCAGAGTGGCCACTCCTGGGGGGCAGAGGGGCAGCCAGGAGGTCAGACAGGCCAGGGGGGGGTGAGTGGCCAGGTGGCGAGCCAGGGAGGGAGTCAAACGACACAgcagatggaggaggaggtgcagcGTCTGTCACAGCAGGTCCTGGACATGCAGGCAGCCATGACCAGCCTGTCTGCCAACCTGAGGGTGGATCTGCAGGAGGACGCCAGCAAGATGCTGGTCACGCTGCTCAACAACTTGCGGCAGCCGGAAAGCGTGCGTGGCGAGCAGCAGAGCATGCTTCTGCAGGACCTCTCCATGGAAAAGGAGTACAAAATGGTGGACATGGACGAGTTCACAAACAAGATCAACAACCTCACAGACACCCTCAACACCAAGAGCAACACCCTGGATGACCTCCATTCCAGGGTCAACCACCATGACGGACAGCTACGTCTGCTAATGGAGGCCACACAGGCCCCTCTGGCCACACCCCCTCCGGCTCCCCCGGCCAATGACGCGGCCCTGCGCGCCTACGTGGATGCAAAGTTTCACGCCCTAAGGGACGAGATGATGGAGGGCATGGAGATCAAGATGTCGGACTTGAAGAACTCGTGTGACTATAAGATTCTATCAGTGCAGGAGCAGTCTGAGTTCCAGGAGAACAGCTACCTCAGCCTGACTGAGCTCCTCGAGTCCAAGGAGATGGACCTCCGCAAGGAGATCCAGGACCTCAAGAATGAGCTGCCTGGTCTGCTTAGGGGAGACGGAACCCCACCAGGTCTGCAGGAGCTGCAGAAGGAGCTGTTCCGGGCCTCTGGGGCCCAGCCAAGACTCCAGTCCAGCCTAGAGAAGAAGCCCGAGCCTGACCAACTCCTGCCCCATGCGGAAGAGCTGGAGGCCCATCTAAACATGTCAGAGAGGAGCGTGGAAGTGCACAGCCTCTTCCTAGAGGAGAAGCTGAGGAGAGAGTGGGCAGAGGGGGCTACAAACCTGAAGAAGGCCATTGAGGACAGGATGAGCTCCATGGAGGACCGGGTAACCAGTCTACTGGTGGAGATAAGCAGCCCCCTATCTAGGCCTCAGGCTGTGCTGGAGGCACTGCCGGGTGAGGTGACCTCTCACAAGACCAGCGTTCAGGCTCTGGAGGACAGATTCAATGCCCTTGACCAGTTGTGCTCTACAGAGTGCAAGTCTGACCAACTGGCCATAGAGAGCATTCAAAATAACCTCCAGGTCTACAAAACTAGCCTAGACACCATGCAGTCTAGCATGAAAGGCCACTCAGCTAGTCTTGTAGACATGGAGGAGTATGTCCAAGGGCAGCTCCTGAACCATACCGCCAGTCTTACAGATACACAGGAAGAGCTATGGGCTCTGAAAGGACGTATGGGAGGACAGGAGGGCTTCCTGTCAGCCCTGGGGCTCTCTCTTAGCCAGCTGTCCCTGGAGCTCCAAGGGCAGCTTCTGAACCACAGTACCAGTCTTGCAGGTGTGGAAGAAGCACTTGAAGCTCTCAGTGGGCGTATTGGAGTGCAGGAAGGCTCTCTGTCAGACTTTGGTGTCTCTCTCAGTGCTCATCTTAAAGATGTGCGGGGAGAGCTGGGAGCTGTCAGCGAGCGTATTGGAGGACAAGAGGGCTCTCTATCGGCCCTGGGTGTATCTCTCAGCCGGCAGTCCCTGGAGCTCCAGCAACTGAACACCTGTTGCCAGAGCAGCGTGGGGCCGGCCCATGATGCCAGGGACCTGCAGGAGCTCCACCTGGCCCAGAGAGAGGAGCTAAGGGCCCGGCTGGAGGAACTGGGACAGAAGGTGAGGTCCGAGGCAGATCACTGCAGGAACAGGACCGAGGGTGTAGCTCTGGACGTTAAAACTGTAGATGGCCGGGTTGCCAGCTTGGATAACATGTGCAGCAGGCTGGAGCCCATCTCCAGCAGCCTGCACAGGATCAAAGAGGGGCTGAACAAGCACATGACCGGCCTGTGGAACTGTGTCAGCGAGATCAACAACACCCTGCTTGCCCACACCAAGGACATCGAAGGATTGAAGGGAACATATCAGAACCTCCAGGACCACTTCTCAGTCATCACCCAGGACCTCCATCATCTAACCACCAGTCCTGAGAACACTGGCGTtcatggaggtgtggaggagtcTGGTAATCCCACTGAGACCAAGCCTGTCCCTCAGAGCCCTGTCCTGCCCATTGGGCCAATACCAGACGGGGCCCTACCACCACATATGATAGAGACTGGGGAGGCAGGAGCCCCCGGAATCATGATCTCTTCCAAACCGCCCAAGGGGGCTGACGGCAGCATGACCCCCATCAAGGGCTTCGCTGGAGCCCCAGCTTCCCCACCCTCTAAAGGGTCTTTAAAGCCTAATATGCCAGTTATTTCTGTTGCCCACATTCCCCTGAGACCGTCATTACACAAACCATACTTAACTTTAACAGGTGAGCGGGTGTCCTTCTCGGCTGGTCTCAACCTCCTGCCCTTCCCTGGTGAGGTGGGCATCATCCGCTTCAACAAGGTGTTGgtgaatgatggaggacactacGACCCTCACACAGGCATCTTCAATGTTCCCATGGAGGGCCATTACCTGCTGACTGCTGTGCTGACAGCCCAGAGAGGTGCCAGGGTGGAGGCAGTGCTCTCTGTGTCCAACCACAGCATCCAGAGGCTGGACACGGCTGGTTACCTTCCTGCTAATGGTGGCGGAGGTGGGGCTAGCTCCACTAGCTGTGACTGCGGAGGCTCAGCCTCCCTGAGCCTGGTTCTCACTCTGAAGCGTGGGGACAGGGCAGGTTTAGTCATGACCGCAGGCAAACTTGCTATCTCAGAGAACACAGAGGTCCTCTCGACGTTTAGCGCCGTGCTTCTCTACACCACCTCCTCAAAAAGATAACCCCCACCAATGAGTAGCATTATAAAGCTCCAACCTTAAAACACTAGTTCTACTTTAGATGTGGGTATGCCTTACAGGTATTGTAGTAACTCATGATGGTACTTTAAAGCAATCTTATGACAGAGCTTTCATACAAAAATAAATGTGTATCAAATATTTTCTCATAAGATCGTTATGGAGGGAACGGGGCTGGCTACTGCCATTCATGGAGTATTCATATTTAGTGATTATATTCTAAAtgcaacatttttttaaattacatctTTGAATGTATgcttgtgttgatgtgtgtgttcaATTTGTTTACATTTGTTGTACCATTTATTTTAAACCTGTGTAATTTTAGGTATTTGCAAATGACTATTTTTATTGAGGACTATCAATTGTACATAGCATTGTAAGCGGAACTACTGTTAAACAAATAGACTGGTCCTTTTCCTACCTGACAAGGGATGCAGAACTTCAAAACGAGCACAGTTGTTTTGAAAGATCTTTGTATTTCATCACCTCCCAGTGAGTCACAATGTTCTTTAGGAACAATGCCTGAAAATGAACTGTTTTGAATCAGAGAACTTCAATTCTGCCCCTGGTACCAGTAATAAAAGCTTTGTCTAAA
>XM_036944231.1
GGGTGTGCGCCAACTCGTTTTTTATTCGGTTAAATTTACGTCTAAAATGACACTCAATCAAATGTATCTATAACACTATGATCTCATTTCAATGCACACTCAATCATTTGGCATATTCTAAAAAGTGTCTTTAGGTTTTGTTCGAAGTTTTATATGAGTAGTACTTTAGTCAGTGTCCCCGCCGATCTGAAGGTGATGGTCATATGACACCCGCATATCAATAAAACATGTTTGCTACAAGATGTATCACTTACAATAAAGTGATGCTAGTCTGACACTCTCACATGTTTGCAAAGCGGGGGGTCCAGAACCGAGTTTGGGAAAACCTGGTGTAAAGCACTGTATTGCATTATCCAGTGGGCTGGATATGAAAGCGTTCCTTTGGGGACTTCGTCACTAGAGTTGCATGCATGCAGTCAACCACATTCAAGTATTTTTCAAGAAAGCAGGGAACATGATCTCCGATACAAACTGAAGCAGATGAGTGAGGAAACTACGAAACGGGATTTAATCACTGTTCTACTGGGAGCGCATTTTACTCTCTGGGAGTGAGGAGCACTGGTGAAGGGGGTTCGCTGTACCCCGAACGTCACGTCACAGGCTGCTATACCCTGGAAGAAAGTTTGTATTATCAGCCTTTCGAGTTGCTGCTAGGAGAGGGACCAAAACGTCTAACCTCAATGCTTACATGTTTAATATTTGTCTACTTTTTTCCGTTGTATTAAAATGAAGTGCCTTCCCACCGGATTCGTCTTAAAAAGTGCCTTATTTCCCTTATTGCTCACCTTTCCATTGATCAATGGAACGCCGTCACGGTATAACATGTTCCAGGGAAGCGCATACTCTGGCTCAGAACAACGACAGAGGAATAAAAACTGGTGTGCATACGTCGTGCAGAAGAACGTGAGCTATGCGGTCGTGGGTGGCACCGAGAGCTTTGTGCAGCCGGAGTCTGCGCCTTGCCAGATGCATCAACTCAACTGCGCGCAACAAGTGATGTATCGAACCCAATTCCGCCCCATGTATAAGGTTGGCTATaagctggtgacagagctggagtGGAGGTGCTGTCCAGGGTACCAGGGTCATGACTGCAAAGATCTGAAAGGTGTCCCGTTCCGTCAGACAGTCCTGGGGCCTCGGTCCAACCCGCCTCCTGCCCCTGGACACATCGCAGAGACACAGGGTCCGGGGCAGCAGGCGTGGGGTCAGAGTGGCCACTCCTGGGGGGCAGAGGGGCAGCCAGGAGGTCAGACAGGCCAGGGGGGGGTGAGTGGCCAGGTGGCGAGCCAGGGAGGGAGTCAAACGACACAgcagatggaggaggaggtgcagcGTCTGTCACAGCAGGTCCTGGACATGCAGGCAGCCATGACCAGCCTGTCTGCCAACCTGAGGGTGGATCTGCAGGAGGACGCCAGCAAGATGCTGGTCACGCTGCTCAACAACTTGCGGCAGCCGGAAAGCGTGCGTGGCGAGCAGCAGAGCATGCTTCTGCAGGACCTCTCCATGGAAAAGGAGTACAAAATGGTGGACATGGACGAGTTCACAAACAAGATCAACAACCTCACAGACACCCTCAACACCAAGAGCAACACCCTGGATGACCTCCATTCCAGGGTCAACCACCATGACGGACAGCTACGTCTGCTAATGGAGGCCACACAGGCCCCTCTGGCCACACCCCCTCCGGCTCCCCCGGCCAATGACGCGGCCCTGCGCGCCTACGTGGATGCAAAGTTTCACGCCCTAAGGGACGAGATGATGGAGGGCATGGAGATCAAGATGTCGGACTTGAAGAACTCGTGTGACTATAAGATTCTATCAGTGCAGGAGCAGTCTGAGTTCCAGGAGAACAGCTACCTCAGCCTGACTGAGCTCCTCGAGTCCAAGGAGATGGACCTCCGCAAGGAGATCCAGGACCTCAAGAATGAGCTGCCTGGTCTGCTTAGGGGAGACGGAACCCCACCAGGTCTGCAGGAGCTGCAGAAGGAGCTGTTCCGGGCCTCTGGGGCCCAGCCAAGACTCCAGTCCAGCCTAGAGAAGAAGCCCGAGCCTGACCAACTCCTGCCCCATGCGGAAGAGCTGGAGGCCCATCTAAACATGTCAGAGAGGAGCGTGGAAGTGCACAGCCTCTTCCTAGAGGAGAAGCTGAGGAGAGAGTGGGCAGAGGGGGCTACAAACCTGAAGAAGGCCATTGAGGACAGGATGAGCTCCATGGAGGACCGGGTAACCAGTCTACTGGTGGAGATAAGCAGCCCCCTATCTAGGCCTCAGGCTGTGCTGGAGGCACTGCCGGGTGAGGTGACCTCTCACAAGACCAGCGTTCAGGCTCTGGAGGACAGATTCAATGCCCTTGACCAGTTGTGCTCTACAGAGTGCAAGTCTGACCAACTGGCCATAGAGAGCATTCAAAATAACCTCCAGGTCTACAAAACTAGCCTAGACACCATGCAGTCTAGCATGAAAGGCCACTCAGCTAGTCTTGTAGACATGGAGGAGTATGTCCAAGGGCAGCTCCTGAACCATACCGCCAGTCTTACAGATACACAGGAAGAGCTATGGGCTCTGAAAGGACGTATGGGAGGACAGGAGGGCTTCCTGTCAGCCCTGGGGCTCTCTCTTAGCCAGCTGTCCCTGGAGCTCCAAGGGCAGCTTCTGAACCACAGTACCAGTCTTGCAGGTGTGGAAGAAGCACTTGAAGCTCTCAGTGGGCGTATTGGAGTGCAGGAAGGCTCTCTGTCAGACTTTGGTGTCTCTCTCAGTGCTCATCTTAAAGATGTGCGGGGAGAGCTGGGAGCTGTCAGCGAGCGTATTGGAGGACAAGAGGGCTCTCTATCGGCCCTGGGTGTATCTCTCAGCCGGCAGTCCCTGGAGCTCCAGCAACTGAACACCTGTTGCCAGAGCAGCGTGGGGCCGGCCCATGATGCCAGGGACCTGCAGGAGCTCCACCTGGCCCAGAGAGAGGAGCTAAGGGCCCGGCTGGAGGAACTGGGACAGAAGGTGAGGTCCGAGGCAGATCACTGCAGGAACAGGACCGAGGGTGTAGCTCTGGACGTTAAAACTGTAGATGGCCGGGTTGCCAGCTTGGATAACATGTGCAGCAGGCTGGAGCCCATCTCCAGCAGCCTGCACAGGATCAAAGAGGGGCTGAACAAGCACATGACCGGCCTGTGGAACTGTGTCAGCGAGATCAACAACACCCTGCTTGCCCACACCAAGGACATCGAAGGATTGAAGGGAACATATCAGAACCTCCAGGACCACTTCTCAGTCATCACCCAGGACCTCCATCATCTAACCACCAGTCCTGAGAACACTGGTGAGCGGGTGTCCTTCTCGGCTGGTCTCAACCTCCTGCCCTTCCCTGGTGAGGTGGGCATCATCCGCTTCAACAAGGTGTTGgtgaatgatggaggacactacGACCCTCACACAGGCATCTTCAATGTTCCCATGGAGGGCCATTACCTGCTGACTGCTGTGCTGACAGCCCAGAGAGGTGCCAGGGTGGAGGCAGTGCTCTCTGTGTCCAACCACAGCATCCAGAGGCTGGACACGGCTGGTTACCTTCCTGCTAATGGTGGCGGAGGTGGGGCTAGCTCCACTAGCTGTGACTGCGGAGGCTCAGCCTCCCTGAGCCTGGTTCTCACTCTGAAGCGTGGGGACAGGGCAGGTTTAGTCATGACCGCAGGCAAACTTGCTATCTCAGAGAACACAGAGGTCCTCTCGACGTTTAGCGCCGTGCTTCTCTACACCACCTCCTCAAAAAGATAACCCCCACCAATGAGTAGCATTATAAAGCTCCAACCTTAAAACACTAGTTCTACTTTAGATGTGGGTATGCCTTACAGGTATTGTAGTAACTCATGATGGTACTTTAAAGCAATCTTATGACAGAGCTTTCATACAAAAATAAATGTGTATCAAATATTTTCTCATAAGATCGTTATGGAGGGAACGGGGCTGGCTACTGCCATTCATGGAGTATTCATATTTAGTGATTATATTCTAAAtgcaacatttttttaaattacatctTTGAATGTATgcttgtgttgatgtgtgtgttcaATTTGTTTACATTTGTTGTACCATTTATTTTAAACCTGTGTAATTTTAGGTATTTGCAAATGACTATTTTTATTGAGGACTATCAATTGTACATAGCATTGTAAGCGGAACTACTGTTAAACAAATAGACTGGTCCTTTTCCTACCTGACAAGGGATGCAGAACTTCAAAACGAGCACAGTTGTTTTGAAAGATCTTTGTATTTCATCACCTCCCAGTGAGTCACAATGTTCTTTAGGAACAATGCCTGAAAATGAACTGTTTTGAATCAGAGAACTTCAATTCTGCCCCTGGTACCAGTAATAAAAGCTTTGTCTAAA

Function

NR:

description
EMILIN-2-like

GO: NA

KEGG:

id description
K24246 EMILIN; emilin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021562958.2 False 4714 mRNA 0.52 9 28316887 28335818
XM_036944231.1 True 4393 mRNA 0.51 6 28316887 28335821

Neighbor

gene id symbol gene type direction distance location
trnal-uag-3 NA coding downstream 8076 28308734 ~ 28308811 (-)
myl12.1 LOC106590146 coding downstream 80005 28232133 ~ 28236882 (-)
fastkd3 LOC106590147 coding downstream 85212 28227285 ~ 28231675 (-)
LOC110489929 LOC106590152 coding downstream 256304 28051643 ~ 28060583 (-)
LOC110489927 LOC106590151 coding downstream 267960 28044204 ~ 28048927 (-)
smchd1 smchd1 coding upstream 1826 28337647 ~ 28377476 (-)
adcyap1a paca coding upstream 223373 28559194 ~ 28565541 (-)
tyms tyms coding upstream 280646 28616467 ~ 28619751 (-)
LOC110489945 clul1 coding upstream 284017 28619838 ~ 28632520 (-)
LOC110489947 LOC106590135 coding upstream 365356 28701177 ~ 28724125 (-)
G1276912 NA non-coding downstream 22756 28292660 ~ 28294131 (-)
G1276887 LOC106590144 non-coding downstream 35071 28279627 ~ 28281816 (-)
G1276896 NA non-coding downstream 69115 28246563 ~ 28247772 (-)
G1276872 LOC106590148 non-coding downstream 102859 28200633 ~ 28214028 (-)
G1276947 NA non-coding upstream 56690 28392511 ~ 28392785 (-)
G1276948 NA non-coding upstream 57851 28393672 ~ 28393997 (-)
G1276949 NA non-coding upstream 58371 28394192 ~ 28394507 (-)
G1276950 NA non-coding upstream 60432 28396253 ~ 28396649 (-)
G1277012 NA non-coding upstream 111772 28447593 ~ 28447800 (-)
G1276905 NA other downstream 51132 28261540 ~ 28265755 (-)
G1276639 NA other downstream 226046 28090494 ~ 28090841 (-)
G1276566 NA other downstream 357453 27959052 ~ 27959434 (-)
LOC110489905 LOC106590176 other downstream 1085408 27228878 ~ 27231497 (-)
LOC110489898 LOC106590183 other downstream 1372723 26941314 ~ 26952371 (-)
G1278860 NA other upstream 1295204 29631025 ~ 29631768 (-)
dlgap1b LOC106590111 other upstream 1643354 29979175 ~ 30253803 (-)
G1281361 NA other upstream 3528413 31864234 ~ 31864636 (-)

Expression

emilin2b(LOC106590142) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
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emilin2b(LOC106590142) Expression in each Bioproject

Bar chart with 20 bars.
emilin2b(LOC106590142) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Co-expression Network