mettl4 (mettl4)


Basic Information

Item Value
gene id mettl4
gene name mettl4
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 28377804 ~ 28389529 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021562965.2
GTTTTCGTTCCGTTTAAGAAAGGTTTTACAACAGAATCGACGTATTGAATATGCCACAGGTTTGGCGAATGCACGTGACGATAGACAATCATCATGGCGGCGCACAGCAATAATGTCCAAGTAGAGAAAGTAGGAAACCCAGCAAAGAAACGAAATGTTACCGTCTCGAATGCAGCACTACAGAGGAGTGAGAATAAAACTACAGTGGATTGTAAACCATCAAAGAAAAGAAAACGAAAATGCAATGATCTGAACCAAGGAGAAATTGATTCATTGGCCTTCCACCACAAGATCAGGTCTGCCATTTTGGAGGGGACCAAATCCTTAGTGGATGCTGGGCTCTCCTGTGAGTACCTGAGTGAGGTCAACGATGCTCAGGAGGGTCCCCTGCCTTCCCACGAATGCAACCTGGCAGCCTTGTGTGACATGGCTAAAGAGCTCCCTCTAGTGAGTGAACATGGAGAGGACCCAGTTCAGTTTATTGAGTCTGAGGATGGCTGTAGTACAACACACCTTGACCTGTTCACACGGATCACAGAGAATTGTATGGACTTTGCCATGGAGGTGATGCTGATGGGAGAGAAATACATTATCCCACCACGATGTGCCTTCCTGCTCTCTGATTTTGCCAGAATGCAGCCCCTGGTTGGTTATGGAAAGTTTTTCGACCTCATTGTCCTGGATCCTCCATGGGAAAACAAGTCTGTAAAAAGGAGTGGCAGGTATAGCTTTCTGCCCTCCTCCCAGCTCAAACGGCTCCCTGTCCCACTGCTGGCCTCCACAGGCTGTGTGGTGGTCACCTGGGTGACCAACAGGCCCAGCCACCTGCGCTTTGTCAGGGACGAGCTGTACCCACACTGGGGTGTGGAGGTGCTGGCAGAGTGGTTCTGGGTCAAGGTCACCAGGTCAGGGGAATATGTGTTTCCACTGGATTCTCCGCATAAGAAGCCTTACGAGGTGTTGGTACTTGGTCGATATCGTGGGTGCGGACACCACTCACACAGCTCTCTGAGGAAGACAGAGCTCCCTATGGAGGAGCAACGTGTGATCGTCAGCGTCCCATCGGCCCTACACTCCCATAAACCTTCACTCTCAGAGGTGTTAAGTCCGTACGTGGGTGCCGACGCCCGGTGCCTGGAGCTGTTTGCCAGAAGCCTGCAGCCAGGATGGACCAGCTGGGGCAACGAGGTGATCAAGTTTCAGCATGTCAGTTATTACACCATGGAGCCCACAGACGAGCCCACAGATACGGCTACAGGATCCTTACATGGAGAgtcctctcctcacttctctctacctcctccaacACCGGACTAATCATCACAGTTTAATAGCATACCGTTGAAGCGTTCCACATCAAAATCCCAATTCGTTTTCATAGTCAAGGAGCCCCtcaaatctctctccctctctccatctcctttgaTCTGTTATTTTCTTTCATTTGGGACTCTTGATTTGTGTTTCTGGGTCGTAGTATGTTGGGGGTGGTGAATCACAGAGCCCATGATGCGATGGAGGGGAGATGAAAGTGCATCGCTCCGGAGCTCAGATCAAGGTTGATGTTTTGAGCTGAAGCTAATAACCTATAGCTCTATGTTCGGTTCAGATACACAACTGTGTGTTACCTCAGAGTGGTGTGTTGTGCATTGATGATGGAGCTATGCTGGCACAATGCCTGGTTTAATAATTGTCAAAGTGTACGTACATGTTTTATGTGCTGAAATGTGTTGGGTAATGTGTATCCATTTAAATCCAAGAGTTGAATAAAGAAACCAaacttta
>XM_021562964.2
TTTCGTTCCGTTTAAGAAAGGTTTTACAACAGAATCGACGTATTGAATATGCCACAGGTTTGGCGAATGCACGTGACGATAGACAATCATCATGGCGGCGCACAGCAATAATGTCCAAGTAGAGAAAGTAGGAAACCCAGCAAAGAAACGAAATGTGTAagtaacgttagcaagctagTCACCCCCACAAGGTACGCTTATGGACACTCACGGCATGTAAAGATATCAAAGAGAGAGTTAGGAGAAAGTAGTTTGCCAACCAGATTGGCTATGTCGATTGTGTTTAGAAATGCCAACGGGTGGCTGTTGGATGCTTGTTCACTTGTCGACAAGGGTGTCCAACTATGTAACGTTACTTCGGAGAGGAAAGCAGCCAGTGGGAAGTCGCATTTTAAATGTTGTTTTAAACATGAGTGTTTTCAGATTTTAAAGTCTCACGTTAGTGTTAAATCAAGTTGTACTGTGACCACAAACGACAGTACCGTCTCGAATGCAGCACTACAGAGGAGTGAGAATAAAACTACAGTGGATTGTAAACCATCAAAGAAAAGAAAACGAAAATGCAATGATCTGAACCAAGGAGAAATTGATTCATTGGCCTTCCACCACAAGATCAGGTCTGCCATTTTGGAGGGGACCAAATCCTTAGTGGATGCTGGGCTCTCCTGTGAGTACCTGAGTGAGGTCAACGATGCTCAGGAGGGTCCCCTGCCTTCCCACGAATGCAACCTGGCAGCCTTGTGTGACATGGCTAAAGAGCTCCCTCTAGTGAGTGAACATGGAGAGGACCCAGTTCAGTTTATTGAGTCTGAGGATGGCTGTAGTACAACACACCTTGACCTGTTCACACGGATCACAGAGAATTGTATGGACTTTGCCATGGAGGTGATGCTGATGGGAGAGAAATACATTATCCCACCACGATGTGCCTTCCTGCTCTCTGATTTTGCCAGAATGCAGCCCCTGGTTGGTTATGGAAAGTTTTTCGACCTCATTGTCCTGGATCCTCCATGGGAAAACAAGTCTGTAAAAAGGAGTGGCAGGTATAGCTTTCTGCCCTCCTCCCAGCTCAAACGGCTCCCTGTCCCACTGCTGGCCTCCACAGGCTGTGTGGTGGTCACCTGGGTGACCAACAGGCCCAGCCACCTGCGCTTTGTCAGGGACGAGCTGTACCCACACTGGGGTGTGGAGGTGCTGGCAGAGTGGTTCTGGGTCAAGGTCACCAGGTCAGGGGAATATGTGTTTCCACTGGATTCTCCGCATAAGAAGCCTTACGAGGTGTTGGTACTTGGTCGATATCGTGGGTGCGGACACCACTCACACAGCTCTCTGAGGAAGACAGAGCTCCCTATGGAGGAGCAACGTGTGATCGTCAGCGTCCCATCGGCCCTACACTCCCATAAACCTTCACTCTCAGAGGTGTTAAGTCCGTACGTGGGTGCCGACGCCCGGTGCCTGGAGCTGTTTGCCAGAAGCCTGCAGCCAGGATGGACCAGCTGGGGCAACGAGGTGATCAAGTTTCAGCATGTCAGTTATTACACCATGGAGCCCACAGACGAGCCCACAGATACGGCTACAGGATCCTTACATGGAGAgtcctctcctcacttctctctacctcctccaacACCGGACTAATCATCACAGTTTAATAGCATACCGTTGAAGCGTTCCACATCAAAATCCCAATTCGTTTTCATAGTCAAGGAGCCCCtcaaatctctctccctctctccatctcctttgaTCTGTTATTTTCTTTCATTTGGGACTCTTGATTTGTGTTTCTGGGTCGTAGTATGTTGGGGGTGGTGAATCACAGAGCCCATGATGCGATGGAGGGGAGATGAAAGTGCATCGCTCCGGAGCTCAGATCAAGGTTGATGTTTTGAGCTGAAGCTAATAACCTATAGCTCTATGTTCGGTTCAGATACACAACTGTGTGTTACCTCAGAGTGGTGTGTTGTGCATTGATGATGGAGCTATGCTGGCACAATGCCTGGTTTAATAATTGTCAAAGTGTACGTACATGTTTTATGTGCTGAAATGTGTTGGGTAATGTGTATCCATTTAAATCCAAGAGTTGAATAAAGAAACCAaacttta
>TU1458267
cagTAGGGATACAGAGGGACACCAACGCTCACTCTCTACCTCAGAGATCCAAACACATCCTCGCCAGATGGCCGAAACGGCAGAAAAAAAGTGTTTATGCTCCTCAGAGTGTGAATAATCTGTTTGCTTTTAATTGTGGCTCCAAAAAACTTTGGTAATTAGCTAAAGTTGAATATTTTCCTCCCAGCATTGTATTGTAATAAGCGGCTAATTGGCAGTGCCCTCTTCGTGCCCGCCCAATTCAATGGCACCCAGCCAGCGTGTGTGAGATTCTAATTGACTTGTGAAAAGATGTGTGCTACTGTTTAAACTCAGAGAACCTGAGATAATGAGGTGTTAAGTCCGTACGTGGGTGCCGACGCCCGGTGCCTGGAGCTGTTTGCCAGAAGCCTGCAGCCAGGATGGACCAGCTGGGGCAACGAGGTGATCAAGTTTCAGCATGTCAGTTATTACACCATGGAGCCCACAGACGAGCCCACAGATACGGCTACAGGATCCTTACATGGAGAgtcctctcctcacttctctctacctcctccaacACCGGACTAATCATCACAGTTTAATAGCATACCGTTGAAGCGTTCCACATCAAAATCCCAATTCGTTTTCATAGTCAAGGAGCCCCtcaaatctctctccctctctccatctcctttgaTCTGTTATTTTCTTTCATTTGGGACTCTTGATTTGTGTTTCTGGGTCGTAGTATGTTGGGGGTGGTGAATCACAGAGCCCATGATGCGATGGAGGGGAGATGAAAGTGCATCGCTCCGGAGCTCAGATCAAGGTTGATGTTTTGAGCTGAAGCTAATAACCTATAGCTCTATGTTCGGTTCAGATACACAACTGTGTGTTACCTCAGAGTGGTGTGTTGTGCATTGATGATGGAGCTATGCTGGCACAATGCCTGGTTTAATAATTGTCAAAGTGTACGTACATGTTTTATGTGCTGAAATGTGTTGGGTAATGTGTATCCATTTAAATCCAAGAGTTGAATAAAGAAACCAaacttta

Function

symbol description
mettl4 Predicted to enable methyltransferase activity and nucleic acid binding activity. Predicted to act upstream of or within methylation. Orthologous to human METTL4 (methyltransferase 4, N6-adenosine).

NR:

description
methyltransferase-like protein 4 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021562965.2 False 1785 mRNA 0.49 9 28377804 28389529
XM_021562964.2 False 2106 mRNA 0.48 8 28377806 28389529
TU1458267 True 1020 lncRNA 0.45 2 28386491 28389529

Neighbor

gene id symbol gene type direction distance location
LOC110489939 LOC106590143 coding upstream 61434 28281872 ~ 28316370 (+)
myom1b LOC106590144 coding upstream 96076 28246518 ~ 28281728 (+)
chmp5b LOC106590149 coding upstream 150117 28222578 ~ 28227687 (+)
LOC110489932 LOC106590150 coding upstream 161559 28205717 ~ 28216245 (+)
LOC110489931 LOC106590150 coding upstream 173515 28200612 ~ 28204289 (+)
LOC110489944 LOC106590138 coding downstream 191094 28580623 ~ 28612037 (+)
LOC100136716 LOC106590136 coding downstream 248218 28637747 ~ 28698956 (+)
LOC110490831 LOC106590071 coding downstream 341547 28731076 ~ 28741476 (+)
LOC110489948 mrc1 coding downstream 367259 28756788 ~ 28777089 (+)
LOC110489949 mrc1 coding downstream 405551 28795080 ~ 28812062 (+)
G1276786 NA non-coding upstream 41922 28334858 ~ 28335882 (+)
G1276779 NA non-coding upstream 55925 28320980 ~ 28321879 (+)
G1276778 NA non-coding upstream 56846 28320408 ~ 28320958 (+)
G1276777 NA non-coding upstream 57463 28319967 ~ 28320341 (+)
G1276776 NA non-coding upstream 58225 28319207 ~ 28319579 (+)
G1276965 NA non-coding downstream 16645 28406174 ~ 28406477 (+)
G1276996 NA non-coding downstream 45410 28434939 ~ 28435199 (+)
G1277000 NA non-coding downstream 47218 28436747 ~ 28436964 (+)
G1277136 NA non-coding downstream 146749 28536278 ~ 28536542 (+)
G1277144 NA non-coding downstream 154809 28544338 ~ 28544622 (+)
G1276733 NA other upstream 121398 28190186 ~ 28256406 (+)
G1276288 NA other upstream 523791 27853618 ~ 27854013 (+)
G1275572 NA other upstream 1275777 27101309 ~ 27102027 (+)
kif9 kif9 other upstream 1415578 26960749 ~ 26974049 (+)
G1274830 NA other upstream 1935417 26440011 ~ 26442387 (+)
G1277159 NA other downstream 184787 28574316 ~ 28624218 (+)
G1277279 NA other downstream 425837 28815366 ~ 28815810 (+)
G1279349 NA other downstream 1913504 30303033 ~ 30303419 (+)
htr5ab htr5a other downstream 2006338 30395817 ~ 30416375 (+)
G1279833 NA other downstream 2554642 30944171 ~ 30947330 (+)
G1276800 NA non-coding upstream 435 28385346 ~ 28386056 (+)

Expression


Co-expression Network