Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110489944 |
| gene name | LOC106590138 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 28580623 ~ 28612037 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | name | namespace |
|---|---|---|
| GO:0018108 | peptidyl-tyrosine phosphorylation | biological_process |
| GO:0005524 | ATP binding | molecular_function |
| GO:0004713 | protein tyrosine kinase activity | molecular_function |
| id | description |
|---|---|
| K05705 | YES1; tyrosine-protein kinase Yes |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036944234.1 | True | 4411 | mRNA | 0.46 | 12 | 28580623 | 28612037 |
28,552,000
28,556,000
28,560,000
28,564,000
28,568,000
28,572,000
28,576,000
28,580,000
28,584,000
28,588,000
28,592,000
28,596,000
28,600,000
28,604,000
28,608,000
28,612,000
28,616,000
NC_048579.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mettl4 | mettl4 | coding | upstream | 191094 | 28377804 ~ 28389529 (+) |
| LOC110489939 | LOC106590143 | coding | upstream | 264253 | 28281872 ~ 28316370 (+) |
| myom1b | LOC106590144 | coding | upstream | 298895 | 28246518 ~ 28281728 (+) |
| chmp5b | LOC106590149 | coding | upstream | 352936 | 28222578 ~ 28227687 (+) |
| LOC110489932 | LOC106590150 | coding | upstream | 364378 | 28205717 ~ 28216245 (+) |
| LOC100136716 | LOC106590136 | coding | downstream | 25710 | 28637747 ~ 28698956 (+) |
| LOC110490831 | LOC106590071 | coding | downstream | 119039 | 28731076 ~ 28741476 (+) |
| LOC110489948 | mrc1 | coding | downstream | 144751 | 28756788 ~ 28777089 (+) |
| LOC110489949 | mrc1 | coding | downstream | 183043 | 28795080 ~ 28812062 (+) |
| LOC110489950 | LOC106590132 | coding | downstream | 214543 | 28826580 ~ 28837296 (+) |
| G1277145 | NA | non-coding | upstream | 35638 | 28544680 ~ 28544985 (+) |
| G1277144 | NA | non-coding | upstream | 36001 | 28544338 ~ 28544622 (+) |
| G1277136 | NA | non-coding | upstream | 44081 | 28536278 ~ 28536542 (+) |
| G1277000 | NA | non-coding | upstream | 143659 | 28436747 ~ 28436964 (+) |
| G1276996 | NA | non-coding | upstream | 145424 | 28434939 ~ 28435199 (+) |
| G1277128 | NA | non-coding | downstream | 2365 | 28614402 ~ 28616681 (+) |
| G1277174 | clul1 | non-coding | downstream | 7932 | 28619969 ~ 28620709 (+) |
| G1277177 | NA | non-coding | downstream | 13468 | 28625505 ~ 28626332 (+) |
| G1277178 | clul1 | non-coding | downstream | 14550 | 28626587 ~ 28631165 (+) |
| G1277186 | NA | non-coding | downstream | 89166 | 28701203 ~ 28703108 (+) |
| G1276733 | NA | other | upstream | 324217 | 28190186 ~ 28256406 (+) |
| G1276288 | NA | other | upstream | 726610 | 27853618 ~ 27854013 (+) |
| G1275572 | NA | other | upstream | 1478596 | 27101309 ~ 27102027 (+) |
| kif9 | kif9 | other | upstream | 1618397 | 26960749 ~ 26974049 (+) |
| G1274830 | NA | other | upstream | 2138236 | 26440011 ~ 26442387 (+) |
| G1277279 | NA | other | downstream | 203329 | 28815366 ~ 28815810 (+) |
| G1279349 | NA | other | downstream | 1690996 | 30303033 ~ 30303419 (+) |
| htr5ab | htr5a | other | downstream | 1783830 | 30395817 ~ 30416375 (+) |
| G1279833 | NA | other | downstream | 2332134 | 30944171 ~ 30947330 (+) |
| G1281462 | NA | other | downstream | 3384130 | 31996167 ~ 31996513 (+) |
