insig1 (insig1)


Basic Information

Item Value
gene id insig1
gene name insig1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 30482017 ~ 30496207 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021563023.2
CCGACACTACTCACCCGACACAGCTGTGATTGTTTTCTGCAGAGGAAGTCTGTCTCTGCTATGAGGTCTGCTGTTAGGAATGATATAGaagctttttctctctctcactcaaacGATGATGTGACCAAACACCGTGATAACAGTCTGAGAGCAGCAAAACGCACAGCATTGTCGGATGAACAAAATCGGGTCTCGCTCGATCAGACAGTGTGAACGTCTGAAGAACAAGCGCTGAAGTGCCAAATGCCAAGACTAGAAGAACACTGCTGGAGACGCTCTTGTACATCGAGGGTGGAATCTAAGAATTATTATAGGGAAAACTGGGTCGCATCGAAGGCTGAAGAAATGATGTCGATTATCACATCAGTGCTTAGCAATGTATACGGCTCGCTGCACAGTGTGCAAACAGCAAACTTAATCAGACGGGGTCTAGTCCTTTTCACCGTGGGAGTATTTCTTGCGTTGGTGCTCAACTTGCTACAGGTTCAAAGAAATGTGACTTTGTTTCCCGAAGAGGTGATGGCAACTTTGTTTTCATCGGCGTGGTGGATTCCCCCTTGCTGCGGCACGGCAGCTGCTGTTGTTGGCCTGCTATACCCCTGCATCGACAGCCATCTCGGAGAGCCCCACAAGTTCAAAAGGGAATGGGCCAGTGTCATGAGATGCATTGCAGTATTTGTTGGCATCAACCATGCCAGTGCTAAACTAGACTTTGCCAATAATGTCCAGCTGTCCCTGACCCTGGCTGCCCTTTCCCTGGGACTATGGTGGACCTTTGACCGCTCGAGGAGTGGCTTCGGCCTGGGCATTGGGACGGCATTCCTTGCCACCGTTATCACACAGCTGCTGGTCTACAACGGTGTATATCAATACACATATCCAGACTTTCTGTATGTGCGCTCTTGGCTTCCATGCATATTCTTCTCGGGGGGAGTGACTGCAGGAAACATAGGACGCCAGCTAGCCATGggTGGTGTTGAGAAACTGCACAACGACTGAACAGAGATCAGCTGAAGAGGAGCGAGAAGAACGGCAACCAATACGGAGAACCAGCATAATGGAACCAAGTCCGACATCATGGGGAGAGACATTTCAGTTTGAAAGAAAACAGactcttattttttttttactacttttCTGTGCATTATAACAAAGAGCTAGCCAGAATCTCCTTTACCTAATGTGCCATGACTTCTGTACCTCCTGGTGGCCAAAATACCTTTCCCCATCCCTGTTCGGGTCCAGACAGCATGAGGTTATAAGTTAGCCACTAGGCTCTCCGTGTTAGGGTCCAGATAGCATTAGGTTATCAGTTAGTTGCTAGACTATTCCTGTTAGGGTCCAAATAGCATTAGGCTAGCAGTTAGCCTCTATGCTATTCCTATTAGGGTCCATGTAGCATTAGGCTAGCTTCTAGCCACTAGCTCTTCACTCACTATGTCAGGACAGTATTTGACCTTCCAGTTCTTCGAAATGAAAAGTTAACTGGTTTCAGAGTGAACTATTTGCTTTTTGCTGGTGTGTGAGTGCACGGGTGCGTGTGGATGTGTGCAGGTCCTAACAGAAAAGACGAGGAAAAAATGTGGAGCTAAATGTTTGCTTTTTTGTTATGACCGAGTACAAAATTATCATAAAAGGGAAATGTTTCAGAGCTGTGCAAAAATGTCTGACACTCAGAGACAGCGACCAGCAGTATGTCACTGATGACATGTATTGTATGTTCCCAATATTGTATGTAATTCACCAAAATAAGTATTTATCTCTGAGAAATTAGAATGCCAACACCTACAACTCCCAAACCAAATACATGAGATCGCAGATGATGTGACCATGTTTTGAACGAATGTACCATGATGCTACAATAAGTTAGCATATTCATAGTTGCAGTAAAATAAGTAATGATAAGAAAAGGCACCCGAATATGATCTGGTGTGAAGCTCACCGTTTGGCTGACTTCCTGGACATGGTGTGCCACCTGGACTTGACCTATGAACCCTCAGATTAGTATATGAATGGTTGATTTTCCATTTAAAGTTTTCCAGACTAGGCATTAAAGTTTGGGAACATACattaagagaaggagagagcacaGGACATTTTTATTACGGCCTAGAGGATTTGCAATCTGTGATTGCCCTTGTATTATACAATTGAGTGCTTTTGTCACTACCATACCAGTTCAGTTGTATTACTTGTACATAATTATATATTGCTTACATGTATAATCTCTTCCCTTTATAATCAGACCGGTATTACCACACTTTACCTATGTAGTTCGATAGTTGGGGGTCTAGAGGAATAAAAGTGCAATCACATATATACCTGAGCCGATTATTCTTCCGTATTTATTATTTCTGTAAATGGTTAAGAGGTGAAACTCTGGAATTATATGCAGTGTGGATATAGAAAATGAGCAGGAAAATTAGCAATAACAGCAgtgtttgtaaaaaaataaaataaagtgtcAGAGATTACTTGCCTTCTGTATACCAATGACTATTCTCACCGTGAGgagaagacaaaaaaaacattgtgtcaaaCCGTTTGTAAAAAATCTCGTAGTAGTTCAACATTCGTAAATGGGAAGACGGATGTATTTATTATTCTTTTTTGTTGGTGATGTATAGATCACGGAGGGGTTGGTTGGTACACCTGGTTCAGTTTGAAGCTTTGCTCAAGTTcaggtgtgtgtcccaaatgacaccctattccctataaacgATGTGGGCACTTCCATGGGGCAGAAGTCAGCGTGTTGTTTTGATTTTGGATGGCCAGATTGCTAGCGCAAATGAcaaactgccatgtggggaatcgtaagtgGCTCGTTTCAGGCTCTTTTTACCTTGTTCTTTAATATGTGTTTTGATTGATTTCATGTCAGTGCTAATATGGCCAAAATATgccagctagctaaccaacaactgtaacggtGTACTCCAGAGacgacaagtgctcattgtgcaaatatatttatgttttcaataaacattgtaGAAGAAATATAGCTTACATCTTGACAACAATATAAGCCAACCCGATCTgctttgccccatagttgcgcacTCGTAGGTTTTGtcgctaaacaaccaacccgtctacgtagtgcactactgaaCAGCGCccttatggccctggtcaaaagtagtgcactatatagggaataaggttccaTTTGGCAAGCAGTCCAGGTGTGCTGCTGGGAGAAAAGATAGCTTTATTATTGGGGTGGTTGAAGCACCTATTATTTCAATATGtagagagtgggtgtgtgtgtttctcttatGTCAGCTGTGTATAATTTGTATTACCTTGAATCCAAGtggaaaaataaaaaagaaacTCCTA

Function

symbol description
insig1 Predicted to enable oxysterol binding activity. Predicted to be involved in several processes, including SREBP signaling pathway; SREBP-SCAP complex retention in endoplasmic reticulum; and cholesterol biosynthetic process. Predicted to act upstream of or within cholesterol metabolic process. Predicted to be located in endoplasmic reticulum membrane. Predicted to be integral component of membrane. Predicted to be part of SREBP-SCAP-Insig complex. Predicted to be active in endoplasmic reticulum. Is expressed in several structures, including anterior axial hypoblast; immature eye; liver; notochord; and yolk syncytial layer. Orthologous to human INSIG1 (insulin induced gene 1).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021563023.2 True 3348 mRNA 0.43 6 30482017 30496207

Neighbor

gene id symbol gene type direction distance location
htr5ab htr5a coding upstream 65642 30395817 ~ 30416375 (+)
LOC110489977 LOC106590110 coding upstream 136451 30329810 ~ 30345566 (+)
tgif1 LOC106590112 coding upstream 505931 29969944 ~ 29976086 (+)
LOC110489968 LOC106590118 coding upstream 786066 29689717 ~ 29695951 (+)
ackr4b LOC106590119 coding upstream 817096 29657968 ~ 29664921 (+)
en2a en2 coding downstream 21789 30517996 ~ 30521339 (+)
LOC118938958 NA coding downstream 36889 30533096 ~ 30533257 (+)
rbm33a rbm33 coding downstream 58864 30555071 ~ 30601062 (+)
rnf32 rnf32 coding downstream 218505 30714712 ~ 30725178 (+)
nom1 nom1 coding downstream 287716 30783923 ~ 30791701 (+)
G1279535 NA non-coding upstream 11671 30470111 ~ 30470346 (+)
G1279525 NA non-coding upstream 25953 30455863 ~ 30456064 (+)
G1279520 NA non-coding upstream 34864 30446877 ~ 30447153 (+)
G1279517 NA non-coding upstream 38305 30443484 ~ 30443712 (+)
G1279504 NA non-coding upstream 47095 30434672 ~ 30434922 (+)
G1279605 NA non-coding downstream 21182 30517389 ~ 30517605 (+)
G1279793 NA non-coding downstream 307596 30803803 ~ 30804010 (+)
G1279758 NA non-coding downstream 325714 30821921 ~ 30822371 (+)
G1279805 NA non-coding downstream 332420 30828627 ~ 30828827 (+)
G1279349 NA other upstream 178598 30303033 ~ 30303419 (+)
G1277279 NA other upstream 1666207 28815366 ~ 28815810 (+)
G1277159 NA other upstream 1857799 28574316 ~ 28624218 (+)
G1276733 NA other upstream 2225611 28190186 ~ 28256406 (+)
G1279833 NA other downstream 447964 30944171 ~ 30947330 (+)
G1281462 NA other downstream 1499960 31996167 ~ 31996513 (+)
G1282302 NA other downstream 2191351 32687558 ~ 32698036 (+)
G1284354 NA other downstream 3615600 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 5539376 36035583 ~ 36093396 (+)

Expression


Co-expression Network