en2a (en2)


Basic Information

Item Value
gene id en2a
gene name en2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 30517996 ~ 30521339 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021563022.2
GAATGTGTTTCAGGATCAGTTAGAAGCCTCTTTATTTACCCTTAGTTTAGTCATTGAAGCACTTGTATTGGATAGACTGAAAACGGATAGTACCAAGTTGGATGGCCAAATGACAAATGGTGTCTATCCAGTGCAACAATATAGGATAGCCAAGTTTGGGAATATATGACCAAAACGATGTTTTTGTCTGTGGGCACTATCGCAAAGGGTTGCATGGTGTCCTGCACACTCAACAAgatttgagtttattttttaaacctttattcaaacatttaaaaagcTACGCGTGACATAGAAGTGGATTGCGCTAATTTCGGTGCGGGAGAGCAATAAAGGGGTTAAAGAAAGAACATTGGAAAGTGTATCAGTATGGAAGAAAATGATCATAGCAACAGAGATGAGGAACGTCAAGTGTCGGCGGATGAGTCAAACAGAGCGATACTTCCCCTATTACAAGCGCCGGGAAACATTCAGCAGATCCCGCATCGAGTCACCAATTTCTTCATCGATAATATCTTACGGCCGGACTTTGGGCGGAAAAAAGAAGGCAACACAGAGCAAGAAGAAAATAGTCACGTTACCAGAGAGCACCATAGCCCGGCTGTTCCAAGAACGGAGCAAGTGGGGAGTACTGTGCCAACGGAAGGAACTTCCACTCCTCATCCAGGCGGCGTGGCCAATAAGGCTGAAATAGTGACCGAAGAGCCCCTGAAACCCCGCGGAGAGAATGGAGATCAGTGCCTAAGCTCGGACTCGGATAGTTCTCAAGCCAGCTCAAATGTACCATCCAAACAGCCTATGCTCTGGCCAGCTTGGGTGTACTGCACCAGATACTCAGACAGGCCATCATCAGGACCGAGATCTCGAAAACCAAAGAAGAAAACCGCCAGCAAAGAGGACAAGCGACCAAGGACGGCCTTCACAGCTGAACAGCTTCAAAGACTAAAAACCGAGTTTCAAACGAACCGGTATTTGACCGAACAGAGGCGACAGGCCTTGGCCCAAGAACTCGGTCTTAACGAATCTCAAATCAAAATCTGGTTCCAGAACAAAAGGGCAAAAATCAAGAAGGCCACGGGCGCAAAAAACACCCTAGCCCTGCACCTGATGGCACAGGGACTGTACAATCATGCTACGACGTCAAAAGATGACAAATCAGACAGCGATTGATTTCGAGATACAGATAACAATGCAATAATTTCACCGAATAAAGGGCCAGTGTATAGAATATACCAGCATAAATTGATcaatatatatagatatttctGCAATATCATGTCTATGAAAATATGttgtaaaaaatgtatgttttcaaTCTCTTGTAACGTGTGTCGTTTTTCTTCCAGGAAAAGTACAAATGCTTCTTATACGCTTCATTTTATATTGCTATTCATTTTCGATTTTTACATTATAGCGCTTTAAACTGGCACTTGACGTTGAGATCTGTCAGTGAAGTGAAAAACAACCTGCTTAAGTCCAAAGAATATTTTCTGCTGCATCCAGGCAACTGTGAATCTTAATAAATTTGCTGACAAGATATTTT

Function

symbol description
en2 Enables sequence-specific double-stranded DNA binding activity. Predicted to be involved in neuron differentiation and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within nervous system development and positive regulation of transcription by RNA polymerase II. Located in fibrillar center and nucleoplasm. Implicated in autistic disorder.

NR:

description
homeobox protein engrailed-2

GO:

id name namespace
GO:0001708 cell fate specification biological_process
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0009952 anterior/posterior pattern specification biological_process
GO:0030901 midbrain development biological_process
GO:0005634 nucleus cellular_component
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0000976 transcription regulatory region sequence-specific DNA binding molecular_function

KEGG:

id description
K09319 EN; homeobox protein engrailed

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021563022.2 True 1543 mRNA 0.43 2 30517996 30521339

Neighbor

gene id symbol gene type direction distance location
insig1 insig1 coding upstream 21789 30482017 ~ 30496207 (+)
htr5ab htr5a coding upstream 101621 30395817 ~ 30416375 (+)
LOC110489977 LOC106590110 coding upstream 172430 30329810 ~ 30345566 (+)
tgif1 LOC106590112 coding upstream 541910 29969944 ~ 29976086 (+)
LOC110489968 LOC106590118 coding upstream 822045 29689717 ~ 29695951 (+)
LOC118938958 NA coding downstream 11757 30533096 ~ 30533257 (+)
rbm33a rbm33 coding downstream 33732 30555071 ~ 30601062 (+)
rnf32 rnf32 coding downstream 193373 30714712 ~ 30725178 (+)
nom1 nom1 coding downstream 262584 30783923 ~ 30791701 (+)
ube3c ube3c coding downstream 288629 30809968 ~ 30857952 (+)
G1279605 NA non-coding upstream 391 30517389 ~ 30517605 (+)
G1279541 NA non-coding upstream 24259 30490585 ~ 30493737 (+)
G1279535 NA non-coding upstream 47650 30470111 ~ 30470346 (+)
G1279525 NA non-coding upstream 61932 30455863 ~ 30456064 (+)
G1279520 NA non-coding upstream 70843 30446877 ~ 30447153 (+)
G1279793 NA non-coding downstream 282464 30803803 ~ 30804010 (+)
G1279758 NA non-coding downstream 300582 30821921 ~ 30822371 (+)
G1279805 NA non-coding downstream 307288 30828627 ~ 30828827 (+)
G1279806 NA non-coding downstream 310327 30831666 ~ 30831998 (+)
G1279349 NA other upstream 214577 30303033 ~ 30303419 (+)
G1277279 NA other upstream 1702186 28815366 ~ 28815810 (+)
G1277159 NA other upstream 1893778 28574316 ~ 28624218 (+)
G1276733 NA other upstream 2261590 28190186 ~ 28256406 (+)
G1279833 NA other downstream 422832 30944171 ~ 30947330 (+)
G1281462 NA other downstream 1474828 31996167 ~ 31996513 (+)
G1282302 NA other downstream 2166219 32687558 ~ 32698036 (+)
G1284354 NA other downstream 3590468 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 5514244 36035583 ~ 36093396 (+)

Expression


Co-expression Network