nom1 (nom1)


Basic Information

Item Value
gene id nom1
gene name nom1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 30783923 ~ 30791701 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021563039.2
CCCccggtgtgtgtgtttcctgggtCGATTGTCAACATCAATGGCTGCCGTCATGAATATACACGTGTCTACAATTTGACGTTTTAAGATAGTTTTGTTTATATATTTCATGTGTTCCAAGGTAACGACTGGtaggttttatatttttatttatttgaaccTTTTTGGTACCTCTTTGCTTCATAAACAAGCTTTTCTTGCTTCATAATCATAAACGAGCTTGTTTGCTTCTCGCCACGCTTTAAACTCGGTGAGACACagaaaataatataattataaaAGTCAGTGTCTTTCGCCAAGTAATAATAATAGCATAGCTAGGTAGTTAACGATAGTTAGTAATATCTGTTGCAGAGATGAAAGGCAAGGGGAAAGcaaagaggaaaggaaagaaagaCACTGGTAAATTGCAAAAGTATATGATGACAGTTAACGACTTTGTAAAAAGTAAGGTAGGCTGTGATGAAACTGAAGAAACGGAAGATGGCAGTGGCTTGAGATTTGTTAagaagaaaaatagaaaagaaaTTCGTAAGGAGCAAAGAAAGATGAAAAAGGCTAAAATTAAGAATCACTATGAAGGCTACAAGGCTCTCAAAGCATCCACTGGTGACAGTGTGGAAGTTGCAACCCTATCTGATAAACAACAAACAAAGAAGGTTAATGGAAAAGTAAAGGAAGACGAGCCAGTATCTCAACAACTCAAGTCAACTCCTGTTGTGACTGCCACAGGAGAGAAGGCTGAGAAAAAAGGACCTAAGAAACCTTctaagaaagaaaagaaaagaaacaaACTTGAGGAATCAAGAAAAAAAGCCCTTTTGGAAGCAAATATTGCTGAGGACAGAGAAATTAAGAGGTTGGAGAGATCTCTTGGGTATAACAAaaggaaaaacaaacaaaaacttcCCCAGTCATTCGCTGATGATGGACTGGATTACATTTTGGGGGTGCTGGATGCTGGATCGGCAGCTTCGGGGATAATGCATGACAGTGATGATGACATGGACATTGCCAAAGAGAAATTAAGGAAATTGGAAGACAGTGAATCTGAAATGTCCGGCGATGAGGAGGAAGAACAAGGAGATGACTCGGAAGAGGAGGGCAGTGAACTAGGCAGAGATGGAGACCTGGATACCATCGAGGAAGATGAGatagaggaggaagaagatggGATGGATGAGGGTGGCGAAAGTGAGATGGATGAGAGTGGTGGAATAGCTTCGGAAGAAGAGAATGTAAAGGATGAGGGAGTTGAGAGTGGAGACTCAACGCTTGCAGGGCCGAAAGCTGACACTGCTGTCCCGTCAGCAGGAAAATACGTGCCCCCTCACCTACGGGACACCGGGGATGATAAGCGCAGAGCTGAGTTGGAGAGACTGAAGAGACAAGTCAAAGGACTTGTGaacagGCTCAGTGAGGCCAACATGGCGTCCATCAGTGGCCAGCTGGAAGAGCTGTACATGAGCTCCAGCCGGAAGGACATGAACGACACCCTGACGGAGATCCTCCTGGCAGCCTGTGTCACCCCAGCCCTGATGCCTGACAGACTGCTCATGGAACACGTCCTGCTTGTCAGCATACTGCATCACACAGTGGGGCTTGAGGTGGGGGCTAATTTCTTGGAGACGGTGGTGCGGCAGTTCGCCGAGTTGTACAAGAGCCCCGGCGAAGGCAAGGAGTGTGACAACCTGGTGGCCATGGTGGCACATCTCTACAACTTCCAGGTGGTGCACGCCCTCCTCATCTTTGACATCCTGAAGATGCTGTTGGGGGCCTTCGCCGAGAAGGACATTGAGCTGGTCCTGTTCGTGCTGAAGAACGTAGGATTCGCCCTGCGGAAGGATGATGCCCTTGCGCTGAAAGAACTCATCTCTGAGGCCCAGAGCAAGGCCAGTGGTGTGGGCACCAAGTTCCAGGACGAAAATAGGGTGCGCTTCATGCTGGAGACCATGTTGGCTCTGAAGAACAACGATATGAGGAAGATCCCTGGCTACGACCCAGAGCCTGTTGAGAGACTCAGAAAGCTGCAGAGAACTCTGATCCACCAGAGTTCGGGGGGCAGTGATGTGAAGCTCAGGGTCTCCCTGGAGAACCTCCTGGCTGCAGAGCAGGTGGGCCGCTGGTGGATCGTGGGCTCATCGTGGTCCGGACTCCCCATGATGGGTGACCAGGGCAACAAGACCTCAAAACAGACTACTGCAGAAGGAAAGTTCAGCGCCAAGGTCTTAGACCTGGCCCGGAAACAGCGAATGAACACGGACATCAGACGAAATATATTCTGCGTGATCATGACCAGCGAGGATTACCTCGATGCCTTTGAGAAGCTGATACGACTGGGGCTGAAGGACCAGCAGGAGAGGGAGATCGTACATGTGCTGATGGACTGCTGCCTCCAGGAGAAGAGCTTCAATGCCTTCTATGCTGTACTGGGAGAGAAGTTCTGTGAGCACGACAGGCGGTTCCAGATGACATTTCAGTTCAGTCTGTGGGACAAATTCAAGGACCTGTCCAGCCTATCCACCAGCACCTTCAGCAACCTGGTCCAGCTGGTCACACGCTTCCTCCGGAGAAagtgcctctccctctccatactcAAGGTGATAGAGTTTGGTGAGTTGGACAAGCCTAAAGTCAAGTTCCTGCGTCAGGTATTGACTAAGCTGTTAAAAGACACAGAGATGGAGGATCTTACAAACATATTTGGAAGGATTTCGGGAATTCCCAAGCTAGGAATGCTGCGGGAGGGCttgaagctgttcatcagtcacTTCCTACTAAAGAATGCCCAGTCGCAGGGACCAGCTGAGCAAGCAGACCTTCTGTCAGAGCGAGCCGAGGTTGCCACCAAGGCCATGGAGGCCAAAGAGACTAAACTCAAACtgtaaaacacaaacacacactgagaccCTGGGAGAACACCAGGAGAACAAAAGAGCCCTGTTGGGGGAACATGCTCGTTTTTTTTACAGACAACAAACCCAAGAGATGTttgtctctgcgtgcagtatgaaggtggttaagaggtagttttgtgagccaatgTGGCATGCTAGCgtacctgtagacttccagtcattacgCTAATGCTCGTTAGCATTGGTTCGAGAAACTACCTCTAACATCCTTCATACTGCGCACGGCGACACAAAAATGGTAacccacgagttcatctgactctggctAAGTAGCACTATTCCTTTAAAGATTTCACcattttgtgtttgtgtgagtttGAGGATTGCCCCAAATACGGACAGACCTCGTTTGAATGATCTCCGTTTCGTAAACAACAGAGATGACTTCTGATGACATCGTAAATATCCAAATGAAGTAGGGGCTTCATCAAGTGGCACTGCTAATGAACATGACGGTGGAAAATATTTCCAGAGTGCAGTTACTCTAATGTATTGAAGTCACTGTCACTCACGGTGGATATTTcctttgtctgtatattttaaGATTAGGATCACTTTATTGGTCAGTTGCACTCAAGGCCCAATCGAAAGTTGACTTCTGCTCTTAACCCAATCCCTACACATACagattgtttttttgggggggggggctgttgttgtgccttgctcaagggcacaaagGCAGGTAACGGCATTGaggatttgataccagcaaccctccAGTTGTGAGCAGTTCCCAACCGATTTTTCCCGTCTGACCCAGGATTCTAACTGGCAACCCAACAGTTGCTGGCTcgcctctctaaccgctaggttacctgctgccccCTTTGTACAAATTTCATGGTTTTCAGTTTTTAAGCTACATCAATGGTATGTAGTGtactaaaatgtattttacagaTGAATACAGGATTAACCCAGTAAAATGTTTCCAAACTGTTTATAAACATTTGATGTCGGTGCATGAGGCAATAATAAACCTTTTTTTCACGTTGATTAA

Function

symbol description
nom1 Predicted to enable RNA binding activity. Acts upstream of or within ribosome biogenesis. Predicted to be active in nucleolus. Is expressed in brain; intestine; liver; and pancreas. Orthologous to human NOM1 (nucleolar protein with MIF4G domain 1).

NR:

description
nucleolar MIF4G domain-containing protein 1

GO: NA

KEGG:

id description
K17583 NOM1; nucleolar MIF4G domain-containing protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021563039.2 True 3921 mRNA 0.47 11 30783923 30791701

Neighbor

gene id symbol gene type direction distance location
rnf32 rnf32 coding upstream 58745 30714712 ~ 30725178 (+)
rbm33a rbm33 coding upstream 182861 30555071 ~ 30601062 (+)
LOC118938958 NA coding upstream 250666 30533096 ~ 30533257 (+)
en2a en2 coding upstream 262584 30517996 ~ 30521339 (+)
insig1 insig1 coding upstream 287716 30482017 ~ 30496207 (+)
ube3c ube3c coding downstream 18267 30809968 ~ 30857952 (+)
dnajb6b NA coding downstream 75277 30866978 ~ 30914115 (+)
LOC118938793 NA coding downstream 118432 30910133 ~ 30911620 (+)
dync2i1 wdr60 coding downstream 497498 31289199 ~ 31306437 (+)
wdr97 LOC106590093 coding downstream 514945 31306646 ~ 31332697 (+)
G1279605 NA non-coding upstream 266318 30517389 ~ 30517605 (+)
G1279541 NA non-coding upstream 290186 30490585 ~ 30493737 (+)
G1279535 NA non-coding upstream 313577 30470111 ~ 30470346 (+)
G1279525 NA non-coding upstream 327859 30455863 ~ 30456064 (+)
G1279793 NA non-coding downstream 12102 30803803 ~ 30804010 (+)
G1279758 NA non-coding downstream 30220 30821921 ~ 30822371 (+)
G1279805 NA non-coding downstream 36926 30828627 ~ 30828827 (+)
G1279806 NA non-coding downstream 39965 30831666 ~ 30831998 (+)
G1279809 NA non-coding downstream 43346 30835047 ~ 30835462 (+)
htr5ab htr5a other upstream 375906 30395817 ~ 30416375 (+)
G1279349 NA other upstream 480504 30303033 ~ 30303419 (+)
G1277279 NA other upstream 1968113 28815366 ~ 28815810 (+)
G1277159 NA other upstream 2159705 28574316 ~ 28624218 (+)
G1276733 NA other upstream 2527517 28190186 ~ 28256406 (+)
G1279833 NA other downstream 152470 30944171 ~ 30947330 (+)
G1281462 NA other downstream 1204466 31996167 ~ 31996513 (+)
G1282302 NA other downstream 1895857 32687558 ~ 32698036 (+)
G1284354 NA other downstream 3320106 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 5243882 36035583 ~ 36093396 (+)

Expression


Co-expression Network