wdr97 (LOC106590093)


Basic Information

Item Value
gene id wdr97
gene name LOC106590093
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 31306646 ~ 31332697 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036944292.1
CGGCAATGAAGATTCTCTACAACGTGGGAAGAGTTTTAGCTACAATGTGGTTGTAACTTAACTCGCTGACAACAGTCTTTGGTGTGAGAAAGAACTACTGTTTAGAACTACGGATGCTACCATGGTCACGAAAATATTTCAACTCAACTAAAGGGTCTGACACTTAGACTGAGCTTTAGGGTGAAAGACATATGCGAGTGCCAAAGAACCCCAACACCACCCCATCGGCGTTAGAGAGGAAGTGCATGCAAAATATCCATGCTCAACTCAGCAGACAACACAGACGAGGAGTGCGGCTTGGTGCAGGCCATGGGGAtggcctcccctcccctcgccgACGAAACCGACCTGGACAGGAAGAGCACGCTGCGGGTTACCCCCCGCCCCACAACAGCGGACCAGGAGGGAGCAGTCAGGGCGGTTAGACGCTCATGGGGGTCAGAGTtacggagagggagggggaattcTGTGGAGGAGAGCGCCAAGGGGAAAGCTCGCAGGATGTGGAAGTTCCTCAGCACTGGAATGAAGCAGAATGTGGACAAGATAAGAAACGTCGATGTCAAGAGCGCTGTTCTCACCCATGGCCTGCAGCACTTACGTAATTTCCCTGGCAACGACCCTGTGCGCCACATGACCTACGGCAAGGGGGCGGCAGGGTTCATCAGCCTTCACAGGGAAGGCAGGGTCGTTATGTACCACCCAGACGGGCGTCTCCGTGACCTCCCACccgcctctgtctctgtcccctacATGGGCCTAACCTCCACTCAGCTCCCTGGGCGTCTGGTGGGCTGGGGGCCCGGGGCAAGCCTCACGCTGCTGGACAGTGAGCTGCGCCCCCTAGCCAATGCTCTAGACCCTCTGGATGTGCGGGTTTGCCAGGTCACAGAGCAGTCCCTGGAGCTGGTGACAGCGGGGGCggggaacgtgtgtgtgtggtgtctgacTCACATGGTGTGCCGGGTGAGAGTGACGGAGGGTCTTGGGCGCCACAGCGTTTTTACCCAGCTGGCGTTGGCCCCCCCGGGCCCCGAGAGGCATCACAGGGCCTTCGTCGTTTACGGGAGAGCTGTGGTTGTCGTTGACCTCACTGCTGGGCGTGTTCTGGAGCACAAAAGGAACCTCCACCTacgGGATATCACTGCACTGGTGTACAGCTTTCATCTGGACTTTGTGGTCACTGCGTCCAAAGATGTTTCCATCAGAGTGTGGGGTCCTGACTGGGGGCTTTGTATGGCGTTCGTAGGACACACTGgtgTGGTGACCTCTCTGGCTTGCTGTCCGGAGTCTGGCCTGctgctctctgcctccctggATGGGACCCTGCGTTGCTGGAGCATGGAGGGGGGGGACCAGGTCCAGTGTTTCCCCATCGAAGGAGGGGAGCCCCCTCTGGGCCTGGGGGGTCCGATGAAAGGGGGCACCTTCTTTACTTTCTCCCAGCAAGGAGTGGACTTCTGGACCATCAGCAGCCTGTATAATCTTCACTGCAGGCTGGGGGGGGACCTGGGTGGCCCCATGAGACAGATAGTAGTTCCCTCTTGCCCCCTGCCCTACCCCTACCCCACCCGGGTGCTTTGCGTCAGCGGGGATAGTAACGTCATGCTAGTGGCTGCCGAGACGGGGGCGGTCCTAACCTCCTTCAGTACCGGGCAGAGGGTAAGGTGCGCCGATTACTGCTTACACAAAGAGATTCTATTGGTCCTGACGGAGGGCGGAACGTTGATCCGGGCCAGCACGCTGACCAACCCAGCGACGTGTGTGGATGAGTGGAAGGCACGAGGACAGGGTCCATGGCAGAGGGAGGAGCAGACGGATGGGGAGGGGGATCAGTGGATCGCAAAGCCAGGCCTAGCCTCCTGCATGGTGCTCTACAGCAACATAGCTGACGGACAGAGAGCGCTAGACGAGTGGAAGAGCCTGCAGGAGCAGAGATGCCAGAGACCCACAAACAAGAAACCGCTTCATGATGCCAAGAACCGGTTCCTGGTAATGCTGGGGCACAATGGCGGCTGTGTGAGTGTGCTTATGCTGGATACAGGAAAGGTGCAGTACAGGACCCCCGCACACAACGGCCAGAAAATCACCTCCCTGCAGGCAGACCCTGAGAACAGCTACCTACTCACAGCCGGCGAGGACAAGGCAGTGCTGGTCTGGAGGGTGTTTCCCTATGCCCAGGAGTGTCTCAGCCTGCACTTGAACCTTTTCTGTGGGCATCCTCCGCTCTACTTGACCCTGTTGGGGCCTCTGCTGGCCCTAGCCTTCCAGGATCCCGATAGCGCCACCTATAGCCTGGTGCACTTCAGCCTGCTCAACCAGAGTCGCACTGACCATCCGCCCAGTGAGGACCATCTGGACTGCATTACGGggCTCTGTGTGTGCCATCAGCTCCGAGTGTTTGCCTCCAGCAGTCAGGATGGAACTGTTCGCATCTGGGATGAAGATAACCGCCTCCTCAGAACCCTCCAGCTGAGTGCGGAGCCTGAGTGTCTGGCCTACAGTGGGCAGAGGGGAGATCTGCTCCTAGGCATCAGAGGGGACCTGTATAGGATCCGCTGTGCCCACCTGCTGCCACATGACTTCCAGCTACGGCTCCTGTCTACGGAGATGTCAGATCCTATCCCTGACTTGCCCATATCTCACACCTCAACAAGGACAAGCAAAACCACGACTGTGGTCTCCCCCATGCCAGGGAAACAACCCAACGGAAAGCAGGACATGACCAAAGATCCAGAGTATGCGGCGCTGCTGGCTCGAAACAGAGACCTGGCCTCACTCCAGGAAGGCACcacagagagaaggaagaggaaacCTCCCACCACGCTGAAAACCAGGAAGGAAGCCTTCGACCGCTATATGAAGATCGTCTACAGCCAGCCCCTCAACATTAAGATTGGGGATGAGGACATGTTTGACCTTCATGCAGCTCTGTTTCCTCCAAAACTACCTGACTGTCGACCATTCACCCCACCCACCTTAAGGAATGGCTTCTTCCCAAACCCTAACTTGGCCAAGCCCCTGCCACCCATAACCAAGCCAGGGCAGGATGAGGAGCTAGAGCCAGCCCCAGCACAGAGCAATCCGGTGGGCTTCATCCCTAACTCTGTGCTAGTGGGCCAGCTGTGGCCAGACGTTGTGGTGGAAAACACAATCCCCAAGCAAACATTCAAACTGAGGGATGAGCAGGACTATGAGGAGGAAGGTGATACTGAAGAAGTTCAGTTTCTGGTGTATGAGAGCGATGAGGAACTGGACATAGGTTCCCCCATACAGCTGGTGAAGAGCCCTCAGAAAGAGAAGAGCCCCCCACCTCCCACTCCAAAGAAGCCAGCCTACGTAATGAGGCCTCCAAAGGCTGTCCCTCCCACTAAGATACCCAAACTGCCGACCCCACCTCCCCCTAGAACCCCAACACCACCCCGCACACCCACCCCCGAGATCCCAGGATTCCTTAAACAgtttgtggatgaggactggttCAAGGATATCTACCAAGACCAAAGGTGTATCAGGCAGGCCCTGTGTCCTGAGGAGTTCTCCATGCAGATTCTGGACTACATGCAGAGTTGTGGTGCCCAACTAAAGATGAGGATGCTGAGCGCGCTTATCACTTTACGCAGACAGGGGGAGCTAGGTAACACAGACAAGCTCAGCAAGGGGCTTATGGGTTCTCTACGCAACAACACCTCATCAAATATGTCTGATGAGGAGCAGCGAGTGGTGAGTGAAATACTCAACGTGTTGGTGTGTCTGGGTCCTGAAAGCCATGAGATCATCGTGGAGCTCCTCACTCTACTGGCCCACAAAGAACTGGGACTACAGAAAACAGTGATGTGCCTGCTGCAGGTGATGGGCGTGGAGGATGCTGACCCATGGCTCGCCATGGAGATGGATCCCTGGGACTCCATGGTCCAGAACCTTCCTGATTCCTGGAAGAGCCTGGGAGAGATGGCTGCAGAGTGGCTGCACTCCTGGACCTCAAAATACAAGGGCCAGAACAGGTCTCTGTTCCTGAAGAATGCAGGGAAGAACCTCTTCACCCCAGTGGATGTGCTCAACTACTTCTGCTCTGTCAAAAGGGATATGTTTTTGAAGGCGCAGACTGTCCCACCAGAGGGGCGCAAAGACACAGTATTGCGTCTCCCTGAATCATCCAGATCTAAGCCAATCCATCGTCTTGGAGAGACCTACAGCATGTCCAGGATACGCAAGCCTCCAGGTGTGATCTTGCCCCCTCTCCCAAACCGCCCTGTCCTCATGGGCTTCACCCCGTTCCTCACCCTGCCCCTGCCGAGGGTCAGCCtgtccccctttcctttccctgtGGACCAGCACTGTTTGAAGGCCTCCCCGCGACGTTACTTCATCCTGGAGCGCTCCTATGTACACTACTATAGATGACACAGCCTCCCAGGTAGCAAGATATTATTCCCCGCACCCAAGACTTTTCCCTTTCCCCTGACAAAGACCAGCCAAACAGATATACTCTTGTTTGAATTAAACATCTCTTGTATAGATCTTTTTTTATTGTATATCACTTGATTCACTCATTACCAATAAAGTTTGAATGACTGTAAACGTCTGTAAAAATTAAACTGTTGTGTGTTGTTCCATGGACAACATGGACGCGATATGAACGGATATGCCAGAGATATTTTTTCATTGTTTGCTTTAATATAAATATAAGCTTATATTGCAGTTTGGAAAATATACAGTACTGTGCAAAAGTTTTAGGCAGGTGTGAAAAAATTCTGTAAAGTAAG

Function

NR:

description
PREDICTED: WD repeat-containing protein KIAA1875-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036944292.1 True 4766 mRNA 0.55 22 31306646 31332697

Neighbor

gene id symbol gene type direction distance location
dync2i1 wdr60 coding upstream 209 31289199 ~ 31306437 (+)
dnajb6b NA coding upstream 392531 30866978 ~ 30914115 (+)
LOC118938793 NA coding upstream 395026 30910133 ~ 30911620 (+)
ube3c ube3c coding upstream 448694 30809968 ~ 30857952 (+)
nom1 nom1 coding upstream 514945 30783923 ~ 30791701 (+)
nrn1a LOC106590090 coding downstream 108797 31441494 ~ 31447498 (+)
LOC110490003 cssa29h18orf63 coding downstream 426029 31758726 ~ 31792146 (+)
LOC110490007 LOC106590083 coding downstream 578089 31910786 ~ 31924479 (+)
inhbaa LOC106590082 coding downstream 630138 31962835 ~ 31974011 (+)
LOC118938888 NA coding downstream 675424 32008121 ~ 32011745 (+)
G1280080 NA non-coding upstream 67780 31237674 ~ 31238866 (+)
G1280062 ncapg2 non-coding upstream 91749 31211341 ~ 31214897 (+)
G1279966 NA non-coding upstream 174493 31084430 ~ 31132153 (+)
G1279958 NA non-coding upstream 179250 31075291 ~ 31127396 (+)
G1280642 NA non-coding downstream 34862 31367559 ~ 31373233 (+)
G1280645 NA non-coding downstream 38857 31371554 ~ 31372376 (+)
G1280663 NA non-coding downstream 64347 31397044 ~ 31397294 (+)
G1280668 NA non-coding downstream 76642 31409339 ~ 31409552 (+)
G1280681 LOC106581772 non-coding downstream 94374 31427071 ~ 31427560 (+)
G1279833 NA other upstream 359316 30944171 ~ 30947330 (+)
htr5ab htr5a other upstream 898629 30395817 ~ 30416375 (+)
G1279349 NA other upstream 1003227 30303033 ~ 30303419 (+)
G1277279 NA other upstream 2490836 28815366 ~ 28815810 (+)
G1277159 NA other upstream 2682428 28574316 ~ 28624218 (+)
G1281462 NA other downstream 663470 31996167 ~ 31996513 (+)
G1282302 NA other downstream 1354861 32687558 ~ 32698036 (+)
G1284354 NA other downstream 2779110 34111807 ~ 34112271 (+)
G1286648 LOC106590042 other downstream 4702886 36035583 ~ 36093396 (+)
G1287489 LOC106590045 other downstream 5176381 36509078 ~ 36510512 (+)

Expression


Co-expression Network