Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110490834 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 32018399 ~ 32032349 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005036084.1 | False | 2562 | mRNA | 0.42 | 4 | 32018399 | 32032349 |
| XR_002468756.2 | True | 484 | mRNA | 0.46 | 3 | 32031510 | 32032349 |
32,018,000
32,020,000
32,022,000
32,024,000
32,026,000
32,028,000
32,030,000
32,032,000
32,034,000
32,036,000
32,038,000
32,040,000
32,042,000
32,044,000
32,046,000
32,048,000
NC_048579.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cidea | LOC106590084 | coding | downstream | 117012 | 31887323 ~ 31901387 (-) |
| tubb6 | LOC106590085 | coding | downstream | 133884 | 31871514 ~ 31884515 (-) |
| dipk1c | LOC106590086 | coding | downstream | 172387 | 31824422 ~ 31846012 (-) |
| LOC110490002 | LOC106590088 | coding | downstream | 260240 | 31750154 ~ 31758159 (-) |
| LOC110490955 | NA | coding | downstream | 389998 | 31616010 ~ 31628401 (-) |
| sugct | LOC106590081 | coding | upstream | 88582 | 32120931 ~ 32286220 (-) |
| LOC110490012 | LOC106590058 | coding | upstream | 525389 | 32557738 ~ 32679847 (-) |
| LOC110490014 | LOC106590055 | coding | upstream | 1234655 | 33267004 ~ 33348714 (-) |
| LOC118938795 | NA | coding | upstream | 1258880 | 33291229 ~ 33294593 (-) |
| LOC110516899 | LOC106595224 | coding | upstream | 1871595 | 33903944 ~ 33906267 (-) |
| G1281531 | NA | non-coding | downstream | 36687 | 31981374 ~ 31981712 (-) |
| G1281526 | NA | non-coding | downstream | 42313 | 31975832 ~ 31976086 (-) |
| G1281525 | NA | non-coding | downstream | 43129 | 31975055 ~ 31975270 (-) |
| G1281514 | NA | non-coding | downstream | 58579 | 31959527 ~ 31959820 (-) |
| G1281511 | NA | non-coding | downstream | 62385 | 31955812 ~ 31956014 (-) |
| G1282150 | NA | non-coding | upstream | 430325 | 32462674 ~ 32462895 (-) |
| G1282164 | NA | non-coding | upstream | 453183 | 32485532 ~ 32485766 (-) |
| G1282197 | NA | non-coding | upstream | 473287 | 32505636 ~ 32505855 (-) |
| G1282204 | NA | non-coding | upstream | 476664 | 32509013 ~ 32509254 (-) |
| G1282224 | NA | non-coding | upstream | 490969 | 32523318 ~ 32523550 (-) |
| G1281363 | NA | other | downstream | 152262 | 31865289 ~ 31866137 (-) |
| G1281361 | NA | other | downstream | 153763 | 31864234 ~ 31864636 (-) |
| dlgap1b | LOC106590111 | other | downstream | 2029883 | 29979175 ~ 30253803 (-) |
| G1278860 | NA | other | downstream | 2386631 | 29631025 ~ 29631768 (-) |
| LOC110489947 | LOC106590135 | other | downstream | 3314846 | 28701177 ~ 28724125 (-) |
| G1282159 | LOC106590060 | other | upstream | 443570 | 32475919 ~ 32478516 (-) |
| G1283257 | NA | other | upstream | 1230231 | 33262580 ~ 33266218 (-) |
| G1285645 | NA | other | upstream | 2952504 | 34984853 ~ 34985274 (-) |
| G1287067 | NA | other | upstream | 4126087 | 36158436 ~ 36158733 (-) |
| G1288280 | NA | other | upstream | 5206825 | 37239174 ~ 37239410 (-) |
