Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110490839 |
| gene name | LOC106588460 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 36805006 ~ 36805955 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC109864672 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002468760.2 | True | 728 | mRNA | 0.48 | 3 | 36805006 | 36805955 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490026 | m3k8 | coding | upstream | 169274 | 36616159 ~ 36635732 (+) |
| LOC110490024 | LOC106590043 | coding | upstream | 540924 | 36166507 ~ 36264082 (+) |
| LOC110490021 | LOC106590041 | coding | upstream | 816757 | 35897274 ~ 35988249 (+) |
| LOC110490020 | LOC106590040 | coding | upstream | 909899 | 35847886 ~ 35895107 (+) |
| LOC110490019 | LOC106578561 | coding | upstream | 989391 | 35736382 ~ 35815615 (+) |
| LOC110490032 | cul2 | coding | downstream | 63258 | 36869213 ~ 36902064 (+) |
| nrp1a | LOC106590027 | coding | downstream | 1041311 | 37847266 ~ 37960593 (+) |
| LOC110490033 | LOC106590025 | coding | downstream | 1168767 | 37974722 ~ 38017988 (+) |
| LOC110490034 | rab18 | coding | downstream | 1212256 | 38018211 ~ 38038025 (+) |
| LOC110490038 | LOC106590019 | coding | downstream | 1688334 | 38494289 ~ 38568479 (+) |
| G1287656 | NA | non-coding | upstream | 23381 | 36775537 ~ 36781625 (+) |
| G1287651 | NA | non-coding | upstream | 39491 | 36762060 ~ 36765515 (+) |
| G1287652 | NA | non-coding | upstream | 40350 | 36762478 ~ 36764656 (+) |
| G1287535 | NA | non-coding | upstream | 224271 | 36580494 ~ 36580735 (+) |
| G1287746 | NA | non-coding | downstream | 23080 | 36829035 ~ 36829298 (+) |
| G1287764 | NA | non-coding | downstream | 37978 | 36843933 ~ 36844141 (+) |
| G1287781 | NA | non-coding | downstream | 62592 | 36868547 ~ 36868890 (+) |
| G1287790 | NA | non-coding | downstream | 88544 | 36894499 ~ 36894905 (+) |
| G1287795 | NA | non-coding | downstream | 104801 | 36910756 ~ 36911107 (+) |
| G1287489 | LOC106590045 | other | upstream | 294494 | 36509078 ~ 36510512 (+) |
| G1286648 | LOC106590042 | other | upstream | 711610 | 36035583 ~ 36093396 (+) |
| G1284354 | NA | other | upstream | 2692735 | 34111807 ~ 34112271 (+) |
| G1282302 | NA | other | upstream | 4106970 | 32687558 ~ 32698036 (+) |
| G1281462 | NA | other | upstream | 4808493 | 31996167 ~ 31996513 (+) |
| G1289491 | NA | other | downstream | 1377481 | 38183436 ~ 38184003 (+) |
| G1289710 | NA | other | downstream | 1788925 | 38594880 ~ 38600241 (+) |
| G1290549 | LOC106590036 | other | downstream | 2231050 | 39037005 ~ 39061248 (+) |
| G1290614 | NA | other | downstream | 2320317 | 39126272 ~ 39127009 (+) |
| G1291464 | NA | other | downstream | 3261603 | 40067558 ~ 40067907 (+) |
