Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110490726 |
| gene name | LOC106600248 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 39082814 ~ 39084700 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| zona pellucida sperm-binding protein 4-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021564185.2 | True | 1195 | mRNA | 0.49 | 3 | 39082814 | 39084700 |
39,080,800
39,081,200
39,081,600
39,082,000
39,082,400
39,082,800
39,083,200
39,083,600
39,084,000
39,084,400
39,084,800
39,085,200
39,085,600
39,086,000
39,086,400
39,086,800
39,087,200
39,087,600
39,088,000
39,088,400
NC_048579.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490723 | LOC106612786 | coding | upstream | 226706 | 38855250 ~ 38856108 (+) |
| LOC110490039 | LOC106590018 | coding | upstream | 502058 | 38576635 ~ 38580756 (+) |
| LOC110490038 | LOC106590019 | coding | upstream | 514335 | 38494289 ~ 38568479 (+) |
| LOC110490034 | rab18 | coding | upstream | 1044789 | 38018211 ~ 38038025 (+) |
| LOC110490033 | LOC106590025 | coding | upstream | 1064826 | 37974722 ~ 38017988 (+) |
| LOC110490841 | NA | coding | downstream | 3373 | 39086859 ~ 39089636 (+) |
| brca2 | NA | coding | downstream | 462644 | 39547344 ~ 39589108 (+) |
| LOC110490049 | LOC106612364 | coding | downstream | 564670 | 39649370 ~ 39684044 (+) |
| LOC110490050 | LOC106612350 | coding | downstream | 827742 | 39845713 ~ 39929225 (+) |
| LOC110490053 | fgf12 | coding | downstream | 852186 | 39936886 ~ 40053076 (+) |
| G1290549 | LOC106590036 | non-coding | upstream | 21566 | 39037005 ~ 39061248 (+) |
| G1290550 | zc3hf | non-coding | upstream | 49394 | 39027242 ~ 39033420 (+) |
| G1290559 | NA | non-coding | upstream | 52184 | 39024349 ~ 39030630 (+) |
| G1290536 | NA | non-coding | upstream | 95272 | 38987279 ~ 38987542 (+) |
| G1290529 | NA | non-coding | upstream | 111907 | 38970674 ~ 38970907 (+) |
| G1290613 | NA | non-coding | downstream | 37981 | 39122681 ~ 39123073 (+) |
| G1290619 | NA | non-coding | downstream | 52091 | 39136791 ~ 39166202 (+) |
| G1290623 | NA | non-coding | downstream | 96536 | 39181236 ~ 39184267 (+) |
| G1290624 | NA | non-coding | downstream | 101762 | 39186462 ~ 39224019 (+) |
| G1289710 | NA | other | upstream | 482573 | 38594880 ~ 38600241 (+) |
| G1289491 | NA | other | upstream | 898811 | 38183436 ~ 38184003 (+) |
| G1287489 | LOC106590045 | other | upstream | 2572302 | 36509078 ~ 36510512 (+) |
| G1286648 | LOC106590042 | other | upstream | 2989418 | 36035583 ~ 36093396 (+) |
| G1290614 | NA | other | downstream | 41572 | 39126272 ~ 39127009 (+) |
| G1291464 | NA | other | downstream | 982858 | 40067558 ~ 40067907 (+) |
| LOC110490048 | il-1racp | other | downstream | 1035569 | 40089464 ~ 40132600 (+) |
| G1293072 | NA | other | downstream | 2498673 | 41583216 ~ 41589030 (+) |
| G1293295 | NA | other | downstream | 2824334 | 41909034 ~ 41909611 (+) |
