Gene
RNA
| Item | Value |
|---|---|
| gene id | trnap-ugg-12 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 41238856 ~ 41238927 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: serine/threonine-protein kinase Nek3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnap-ugg-12 | True | 72 | mRNA | 0.61 | 1 | 41238856 | 41238927 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnap-ugg-11 | NA | coding | upstream | 1799 | 41236986 ~ 41237057 (+) |
| LOC110490065 | LOC106580667 | coding | upstream | 81999 | 41093530 ~ 41156857 (+) |
| tfdp2 | LOC105026801 | coding | upstream | 150318 | 41030376 ~ 41088538 (+) |
| LOC110490048 | il-1racp | coding | upstream | 1106256 | 40089464 ~ 40132600 (+) |
| LOC110490053 | fgf12 | coding | upstream | 1185780 | 39936886 ~ 40053076 (+) |
| trnap-ugg-13 | NA | coding | downstream | 864 | 41239791 ~ 41239862 (+) |
| trnap-ugg-14 | NA | coding | downstream | 1799 | 41240726 ~ 41240797 (+) |
| trnap-ugg-15 | NA | coding | downstream | 3669 | 41242596 ~ 41242667 (+) |
| trnap-ugg-16 | NA | coding | downstream | 4604 | 41243531 ~ 41243602 (+) |
| trnap-ugg-17 | NA | coding | downstream | 5539 | 41244466 ~ 41244537 (+) |
| G1292932 | NA | non-coding | upstream | 3837 | 41234547 ~ 41235019 (+) |
| G1292922 | NA | non-coding | upstream | 13084 | 41225537 ~ 41225772 (+) |
| G1292792 | NA | non-coding | upstream | 41079 | 41197095 ~ 41197777 (+) |
| G1292775 | LOC106612405 | non-coding | upstream | 61793 | 41176206 ~ 41177063 (+) |
| G1292774 | NA | non-coding | upstream | 63136 | 41175464 ~ 41175720 (+) |
| G1292939 | NA | non-coding | downstream | 19954 | 41258881 ~ 41385174 (+) |
| G1292941 | NA | non-coding | downstream | 23441 | 41262368 ~ 41263796 (+) |
| G1292944 | NA | non-coding | downstream | 49977 | 41288904 ~ 41384912 (+) |
| trnap-cgg-68 | NA | non-coding | downstream | 121880 | 41360807 ~ 41381768 (+) |
| trnap-cgg-114 | NA | non-coding | downstream | 168046 | 41406973 ~ 41407518 (+) |
| G1291464 | NA | other | upstream | 1170949 | 40067558 ~ 40067907 (+) |
| G1290614 | NA | other | upstream | 2111847 | 39126272 ~ 39127009 (+) |
| G1290549 | LOC106590036 | other | upstream | 2201197 | 39037005 ~ 39061248 (+) |
| G1289710 | NA | other | upstream | 2638615 | 38594880 ~ 38600241 (+) |
| G1293072 | NA | other | downstream | 344446 | 41583216 ~ 41589030 (+) |
| G1293295 | NA | other | downstream | 670107 | 41909034 ~ 41909611 (+) |
| G1294319 | NA | other | downstream | 1525926 | 42764853 ~ 42767937 (+) |
| G1295348 | LOC106602853 | other | downstream | 2357997 | 43596924 ~ 43597464 (+) |
| G1295730 | NA | other | downstream | 2677251 | 43916178 ~ 43916479 (+) |
