trnap-ugg-33


Basic Information

Item Value
gene id trnap-ugg-33
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 41262750 ~ 41262821 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-ugg-33
ggctcgttggtctaggggtatgattctcgctttgggtgcgagaggtcccgggttcaaatcctggacgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-ugg-33 True 72 mRNA 0.61 1 41262750 41262821

Neighbor

gene id symbol gene type direction distance location
trnap-ugg-32 NA coding upstream 864 41261815 ~ 41261886 (+)
trnap-ugg-31 NA coding upstream 2735 41259944 ~ 41260015 (+)
trnap-ugg-30 NA coding upstream 3645 41259034 ~ 41259105 (+)
trnap-ugg-29 NA coding upstream 4563 41258116 ~ 41258187 (+)
trnap-ugg-28 NA coding upstream 5481 41257198 ~ 41257269 (+)
trnap-ugg-34 NA coding downstream 865 41263686 ~ 41263757 (+)
trnap-ugg-35 NA coding downstream 2086 41264907 ~ 41264978 (+)
trnap-ugg-36 NA coding downstream 3021 41265842 ~ 41265913 (+)
trnap-ugg-37 NA coding downstream 6729 41269550 ~ 41269621 (+)
trnap-ugg-38 NA coding downstream 10393 41273214 ~ 41273285 (+)
G1292932 NA non-coding upstream 27731 41234547 ~ 41235019 (+)
G1292922 NA non-coding upstream 36978 41225537 ~ 41225772 (+)
G1292792 NA non-coding upstream 64973 41197095 ~ 41197777 (+)
G1292775 LOC106612405 non-coding upstream 85687 41176206 ~ 41177063 (+)
G1292774 NA non-coding upstream 87030 41175464 ~ 41175720 (+)
G1292944 NA non-coding downstream 26083 41288904 ~ 41384912 (+)
trnap-cgg-68 NA non-coding downstream 97986 41360807 ~ 41381768 (+)
trnap-cgg-114 NA non-coding downstream 144152 41406973 ~ 41407518 (+)
trnap-cgg-115 NA non-coding downstream 145027 41407848 ~ 41408132 (+)
trnap-cgg-116 NA non-coding downstream 145928 41408749 ~ 41409089 (+)
LOC110490048 il-1racp other upstream 1132016 40089464 ~ 40132600 (+)
G1291464 NA other upstream 1194843 40067558 ~ 40067907 (+)
G1290614 NA other upstream 2135741 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 2225091 39037005 ~ 39061248 (+)
G1289710 NA other upstream 2662509 38594880 ~ 38600241 (+)
G1293072 NA other downstream 320552 41583216 ~ 41589030 (+)
G1293295 NA other downstream 646213 41909034 ~ 41909611 (+)
G1294319 NA other downstream 1502032 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 2334103 43596924 ~ 43597464 (+)
G1295730 NA other downstream 2653357 43916178 ~ 43916479 (+)

Expression


Co-expression Network