trnap-ugg-34


Basic Information

Item Value
gene id trnap-ugg-34
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 41263686 ~ 41263757 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-ugg-34
ggctcgttggtctaggggtatgattcttgctttgggtgcgagaggtcccgggttcaaatcctggacgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-ugg-34 True 72 mRNA 0.61 1 41263686 41263757

Neighbor

gene id symbol gene type direction distance location
trnap-ugg-33 NA coding upstream 865 41262750 ~ 41262821 (+)
trnap-ugg-32 NA coding upstream 1800 41261815 ~ 41261886 (+)
trnap-ugg-31 NA coding upstream 3671 41259944 ~ 41260015 (+)
trnap-ugg-30 NA coding upstream 4581 41259034 ~ 41259105 (+)
trnap-ugg-29 NA coding upstream 5499 41258116 ~ 41258187 (+)
trnap-ugg-35 NA coding downstream 1150 41264907 ~ 41264978 (+)
trnap-ugg-36 NA coding downstream 2085 41265842 ~ 41265913 (+)
trnap-ugg-37 NA coding downstream 5793 41269550 ~ 41269621 (+)
trnap-ugg-38 NA coding downstream 9457 41273214 ~ 41273285 (+)
trnap-ugg-39 NA coding downstream 10377 41274134 ~ 41274205 (+)
G1292932 NA non-coding upstream 28667 41234547 ~ 41235019 (+)
G1292922 NA non-coding upstream 37914 41225537 ~ 41225772 (+)
G1292792 NA non-coding upstream 65909 41197095 ~ 41197777 (+)
G1292775 LOC106612405 non-coding upstream 86623 41176206 ~ 41177063 (+)
G1292774 NA non-coding upstream 87966 41175464 ~ 41175720 (+)
G1292944 NA non-coding downstream 25147 41288904 ~ 41384912 (+)
trnap-cgg-68 NA non-coding downstream 97050 41360807 ~ 41381768 (+)
trnap-cgg-114 NA non-coding downstream 143216 41406973 ~ 41407518 (+)
trnap-cgg-115 NA non-coding downstream 144091 41407848 ~ 41408132 (+)
trnap-cgg-116 NA non-coding downstream 144992 41408749 ~ 41409089 (+)
LOC110490048 il-1racp other upstream 1132952 40089464 ~ 40132600 (+)
G1291464 NA other upstream 1195779 40067558 ~ 40067907 (+)
G1290614 NA other upstream 2136677 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 2226027 39037005 ~ 39061248 (+)
G1289710 NA other upstream 2663445 38594880 ~ 38600241 (+)
G1293072 NA other downstream 319616 41583216 ~ 41589030 (+)
G1293295 NA other downstream 645277 41909034 ~ 41909611 (+)
G1294319 NA other downstream 1501096 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 2333167 43596924 ~ 43597464 (+)
G1295730 NA other downstream 2652421 43916178 ~ 43916479 (+)

Expression


Co-expression Network