trnap-ugg-40


Basic Information

Item Value
gene id trnap-ugg-40
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 41275052 ~ 41275122 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-ugg-40
ggctcgttggtctaggggtatgattctcgctttgggtgcgagaggtcccggttcaaatcccggacgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-ugg-40 True 71 mRNA 0.61 1 41275052 41275122

Neighbor

gene id symbol gene type direction distance location
trnap-ugg-39 NA coding upstream 847 41274134 ~ 41274205 (+)
trnap-ugg-38 NA coding upstream 1767 41273214 ~ 41273285 (+)
trnap-ugg-37 NA coding upstream 5431 41269550 ~ 41269621 (+)
trnap-ugg-36 NA coding upstream 9139 41265842 ~ 41265913 (+)
trnap-ugg-35 NA coding upstream 10074 41264907 ~ 41264978 (+)
trnap-ugg-41 NA coding downstream 845 41275967 ~ 41276038 (+)
trnap-ugg-42 NA coding downstream 2686 41277808 ~ 41277879 (+)
trnap-ugg-43 NA coding downstream 3621 41278743 ~ 41278814 (+)
trnap-ugg-44 NA coding downstream 4537 41279659 ~ 41279730 (+)
trnap-ugg-45 NA coding downstream 5470 41280592 ~ 41280662 (+)
G1292941 NA non-coding upstream 11256 41262368 ~ 41263796 (+)
G1292932 NA non-coding upstream 40033 41234547 ~ 41235019 (+)
G1292922 NA non-coding upstream 49280 41225537 ~ 41225772 (+)
G1292792 NA non-coding upstream 77275 41197095 ~ 41197777 (+)
G1292775 LOC106612405 non-coding upstream 97989 41176206 ~ 41177063 (+)
G1292944 NA non-coding downstream 13782 41288904 ~ 41384912 (+)
trnap-cgg-68 NA non-coding downstream 85685 41360807 ~ 41381768 (+)
trnap-cgg-114 NA non-coding downstream 131851 41406973 ~ 41407518 (+)
trnap-cgg-115 NA non-coding downstream 132726 41407848 ~ 41408132 (+)
trnap-cgg-116 NA non-coding downstream 133627 41408749 ~ 41409089 (+)
LOC110490048 il-1racp other upstream 1144318 40089464 ~ 40132600 (+)
G1291464 NA other upstream 1207145 40067558 ~ 40067907 (+)
G1290614 NA other upstream 2148043 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 2237393 39037005 ~ 39061248 (+)
G1289710 NA other upstream 2674811 38594880 ~ 38600241 (+)
G1293072 NA other downstream 308251 41583216 ~ 41589030 (+)
G1293295 NA other downstream 633912 41909034 ~ 41909611 (+)
G1294319 NA other downstream 1489731 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 2321802 43596924 ~ 43597464 (+)
G1295730 NA other downstream 2641056 43916178 ~ 43916479 (+)

Expression


Co-expression Network