trnap-cgg-63


Basic Information

Item Value
gene id trnap-cgg-63
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 41355719 ~ 41355790 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-cgg-63
ggctcgttggtctaggggtatgattctcgcttcgggtgcgagaggtcccgggttcaaatcccggacgagccc

Function

NR:

description
PREDICTED: serine/threonine-protein kinase Nek3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-cgg-63 True 72 mRNA 0.63 1 41355719 41355790

Neighbor

gene id symbol gene type direction distance location
trnap-cgg-62 NA coding upstream 1671 41353977 ~ 41354048 (+)
trnap-cgg-61 NA coding upstream 2529 41353119 ~ 41353190 (+)
trnap-cgg-60 NA coding upstream 3405 41352243 ~ 41352314 (+)
trnap-cgg-59 NA coding upstream 4283 41351365 ~ 41351436 (+)
trnap-cgg-58 NA coding upstream 5158 41350490 ~ 41350561 (+)
trnap-cgg-64 NA coding downstream 796 41356586 ~ 41356657 (+)
trnap-ugg-63 NA coding downstream 1671 41357461 ~ 41357532 (+)
trnap-cgg-65 NA coding downstream 2546 41358336 ~ 41358407 (+)
trnap-cgg-66 NA coding downstream 3421 41359211 ~ 41359282 (+)
trnap-cgg-67 NA coding downstream 4296 41360086 ~ 41360157 (+)
G1292941 NA non-coding upstream 91923 41262368 ~ 41263796 (+)
G1292932 NA non-coding upstream 120700 41234547 ~ 41235019 (+)
G1292922 NA non-coding upstream 129947 41225537 ~ 41225772 (+)
G1292792 NA non-coding upstream 157942 41197095 ~ 41197777 (+)
G1292775 LOC106612405 non-coding upstream 178656 41176206 ~ 41177063 (+)
trnap-cgg-68 NA non-coding downstream 5017 41360807 ~ 41381768 (+)
trnap-cgg-114 NA non-coding downstream 51183 41406973 ~ 41407518 (+)
trnap-cgg-115 NA non-coding downstream 52058 41407848 ~ 41408132 (+)
trnap-cgg-116 NA non-coding downstream 52959 41408749 ~ 41409089 (+)
trnap-cgg-127 NA non-coding downstream 63218 41419008 ~ 41419424 (+)
LOC110490048 il-1racp other upstream 1224985 40089464 ~ 40132600 (+)
G1291464 NA other upstream 1287812 40067558 ~ 40067907 (+)
G1290614 NA other upstream 2228710 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 2318060 39037005 ~ 39061248 (+)
G1289710 NA other upstream 2755478 38594880 ~ 38600241 (+)
G1293072 NA other downstream 227583 41583216 ~ 41589030 (+)
G1293295 NA other downstream 553244 41909034 ~ 41909611 (+)
G1294319 NA other downstream 1409063 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 2241134 43596924 ~ 43597464 (+)
G1295730 NA other downstream 2560388 43916178 ~ 43916479 (+)

Expression


Co-expression Network