trnap-ugg-63


Basic Information

Item Value
gene id trnap-ugg-63
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 41357461 ~ 41357532 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-ugg-63
ggctcgttggtctaggggtatgattctcgctttgggtgcgagaggtcccgggttcaaatcccggacgagccc

Function

NR:

description
PREDICTED: serine/threonine-protein kinase Nek3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-ugg-63 True 72 mRNA 0.61 1 41357461 41357532

Neighbor

gene id symbol gene type direction distance location
trnap-cgg-64 NA coding upstream 804 41356586 ~ 41356657 (+)
trnap-cgg-63 NA coding upstream 1671 41355719 ~ 41355790 (+)
trnap-cgg-62 NA coding upstream 3413 41353977 ~ 41354048 (+)
trnap-cgg-61 NA coding upstream 4271 41353119 ~ 41353190 (+)
trnap-cgg-60 NA coding upstream 5147 41352243 ~ 41352314 (+)
trnap-cgg-65 NA coding downstream 804 41358336 ~ 41358407 (+)
trnap-cgg-66 NA coding downstream 1679 41359211 ~ 41359282 (+)
trnap-cgg-67 NA coding downstream 2554 41360086 ~ 41360157 (+)
trnap-cgg-68 NA coding downstream 3429 41360807 ~ 41381768 (+)
trnap-cgg-69 NA coding downstream 4343 41361875 ~ 41361946 (+)
G1292941 NA non-coding upstream 93665 41262368 ~ 41263796 (+)
G1292932 NA non-coding upstream 122442 41234547 ~ 41235019 (+)
G1292922 NA non-coding upstream 131689 41225537 ~ 41225772 (+)
G1292792 NA non-coding upstream 159684 41197095 ~ 41197777 (+)
G1292775 LOC106612405 non-coding upstream 180398 41176206 ~ 41177063 (+)
trnap-cgg-114 NA non-coding downstream 49441 41406973 ~ 41407518 (+)
trnap-cgg-115 NA non-coding downstream 50316 41407848 ~ 41408132 (+)
trnap-cgg-116 NA non-coding downstream 51217 41408749 ~ 41409089 (+)
trnap-cgg-127 NA non-coding downstream 61476 41419008 ~ 41419424 (+)
LOC110490048 il-1racp other upstream 1226727 40089464 ~ 40132600 (+)
G1291464 NA other upstream 1289554 40067558 ~ 40067907 (+)
G1290614 NA other upstream 2230452 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 2319802 39037005 ~ 39061248 (+)
G1289710 NA other upstream 2757220 38594880 ~ 38600241 (+)
G1293072 NA other downstream 225841 41583216 ~ 41589030 (+)
G1293295 NA other downstream 551502 41909034 ~ 41909611 (+)
G1294319 NA other downstream 1407321 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 2239392 43596924 ~ 43597464 (+)
G1295730 NA other downstream 2558646 43916178 ~ 43916479 (+)

Expression


Co-expression Network