trnap-cgg-66


Basic Information

Item Value
gene id trnap-cgg-66
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 41359211 ~ 41359282 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-cgg-66
ggctcgttggtctaggggtatgattctcgcttcgggtgcgagaggtcccgggttcaaatcccggacgagccc

Function

NR:

description
PREDICTED: serine/threonine-protein kinase Nek3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-cgg-66 True 72 mRNA 0.63 1 41359211 41359282

Neighbor

gene id symbol gene type direction distance location
trnap-cgg-65 NA coding upstream 804 41358336 ~ 41358407 (+)
trnap-ugg-63 NA coding upstream 1679 41357461 ~ 41357532 (+)
trnap-cgg-64 NA coding upstream 2554 41356586 ~ 41356657 (+)
trnap-cgg-63 NA coding upstream 3421 41355719 ~ 41355790 (+)
trnap-cgg-62 NA coding upstream 5163 41353977 ~ 41354048 (+)
trnap-cgg-67 NA coding downstream 804 41360086 ~ 41360157 (+)
trnap-cgg-68 NA coding downstream 1679 41360807 ~ 41381768 (+)
trnap-cgg-69 NA coding downstream 2593 41361875 ~ 41361946 (+)
trnap-cgg-70 NA coding downstream 3468 41362750 ~ 41362821 (+)
trnap-cgg-71 NA coding downstream 4382 41363664 ~ 41363735 (+)
G1292941 NA non-coding upstream 95415 41262368 ~ 41263796 (+)
G1292932 NA non-coding upstream 124192 41234547 ~ 41235019 (+)
G1292922 NA non-coding upstream 133439 41225537 ~ 41225772 (+)
G1292792 NA non-coding upstream 161434 41197095 ~ 41197777 (+)
G1292775 LOC106612405 non-coding upstream 182148 41176206 ~ 41177063 (+)
trnap-cgg-114 NA non-coding downstream 47691 41406973 ~ 41407518 (+)
trnap-cgg-115 NA non-coding downstream 48566 41407848 ~ 41408132 (+)
trnap-cgg-116 NA non-coding downstream 49467 41408749 ~ 41409089 (+)
trnap-cgg-127 NA non-coding downstream 59726 41419008 ~ 41419424 (+)
LOC110490048 il-1racp other upstream 1228477 40089464 ~ 40132600 (+)
G1291464 NA other upstream 1291304 40067558 ~ 40067907 (+)
G1290614 NA other upstream 2232202 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 2321552 39037005 ~ 39061248 (+)
G1289710 NA other upstream 2758970 38594880 ~ 38600241 (+)
G1293072 NA other downstream 224091 41583216 ~ 41589030 (+)
G1293295 NA other downstream 549752 41909034 ~ 41909611 (+)
G1294319 NA other downstream 1405571 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 2237642 43596924 ~ 43597464 (+)
G1295730 NA other downstream 2556896 43916178 ~ 43916479 (+)

Expression


Co-expression Network