trnap-cgg-70


Basic Information

Item Value
gene id trnap-cgg-70
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 41362750 ~ 41362821 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-cgg-70
ggctcgttggtctaggggtatgattctcgcttcgggtgcgagaggtcccgggttcaaatcccggacgagccc

Function

NR:

description
PREDICTED: serine/threonine-protein kinase Nek3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-cgg-70 True 72 mRNA 0.63 1 41362750 41362821

Neighbor

gene id symbol gene type direction distance location
trnap-cgg-69 NA coding upstream 804 41361875 ~ 41361946 (+)
trnap-cgg-68 NA coding upstream 1718 41360807 ~ 41381768 (+)
trnap-cgg-67 NA coding upstream 2593 41360086 ~ 41360157 (+)
trnap-cgg-66 NA coding upstream 3468 41359211 ~ 41359282 (+)
trnap-cgg-65 NA coding upstream 4343 41358336 ~ 41358407 (+)
trnap-cgg-71 NA coding downstream 843 41363664 ~ 41363735 (+)
trnap-cgg-72 NA coding downstream 1718 41364539 ~ 41364610 (+)
trnap-ugg-64 NA coding downstream 2593 41365414 ~ 41365485 (+)
trnap-cgg-73 NA coding downstream 3508 41366329 ~ 41366400 (+)
trnap-cgg-74 NA coding downstream 4423 41367244 ~ 41367315 (+)
G1292941 NA non-coding upstream 98954 41262368 ~ 41263796 (+)
G1292932 NA non-coding upstream 127731 41234547 ~ 41235019 (+)
G1292922 NA non-coding upstream 136978 41225537 ~ 41225772 (+)
G1292792 NA non-coding upstream 164973 41197095 ~ 41197777 (+)
G1292775 LOC106612405 non-coding upstream 185687 41176206 ~ 41177063 (+)
trnap-cgg-114 NA non-coding downstream 44152 41406973 ~ 41407518 (+)
trnap-cgg-115 NA non-coding downstream 45027 41407848 ~ 41408132 (+)
trnap-cgg-116 NA non-coding downstream 45928 41408749 ~ 41409089 (+)
trnap-cgg-127 NA non-coding downstream 56187 41419008 ~ 41419424 (+)
trnap-cgg-152 NA non-coding downstream 81405 41444226 ~ 41444783 (+)
LOC110490048 il-1racp other upstream 1232016 40089464 ~ 40132600 (+)
G1291464 NA other upstream 1294843 40067558 ~ 40067907 (+)
G1290614 NA other upstream 2235741 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 2325091 39037005 ~ 39061248 (+)
G1289710 NA other upstream 2762509 38594880 ~ 38600241 (+)
G1293072 NA other downstream 220552 41583216 ~ 41589030 (+)
G1293295 NA other downstream 546213 41909034 ~ 41909611 (+)
G1294319 NA other downstream 1402032 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 2234103 43596924 ~ 43597464 (+)
G1295730 NA other downstream 2553357 43916178 ~ 43916479 (+)

Expression


Co-expression Network