trnap-cgg-80


Basic Information

Item Value
gene id trnap-cgg-80
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 41372610 ~ 41372681 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-cgg-80
ggctcgttggtctaggggtatgattctcgcttcgggtgcgagaggtcctgggttcaaatcccggacgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-cgg-80 True 72 mRNA 0.61 1 41372610 41372681

Neighbor

gene id symbol gene type direction distance location
trnap-cgg-79 NA coding upstream 843 41371696 ~ 41371767 (+)
trnap-cgg-78 NA coding upstream 1719 41370820 ~ 41370891 (+)
trnap-cgg-77 NA coding upstream 2594 41369945 ~ 41370016 (+)
trnap-cgg-76 NA coding upstream 3505 41369034 ~ 41369105 (+)
trnap-cgg-75 NA coding upstream 4420 41368119 ~ 41368190 (+)
trnap-cgg-81 NA coding downstream 806 41373487 ~ 41373558 (+)
trnap-cgg-82 NA coding downstream 1722 41374403 ~ 41374475 (+)
trnap-cgg-83 NA coding downstream 2600 41375281 ~ 41375352 (+)
trnap-cgg-84 NA coding downstream 3475 41376156 ~ 41376227 (+)
trnap-cgg-85 NA coding downstream 4354 41377035 ~ 41377106 (+)
G1292941 NA non-coding upstream 108814 41262368 ~ 41263796 (+)
G1292932 NA non-coding upstream 137591 41234547 ~ 41235019 (+)
G1292922 NA non-coding upstream 146838 41225537 ~ 41225772 (+)
G1292792 NA non-coding upstream 174833 41197095 ~ 41197777 (+)
G1292775 LOC106612405 non-coding upstream 195547 41176206 ~ 41177063 (+)
trnap-cgg-114 NA non-coding downstream 34292 41406973 ~ 41407518 (+)
trnap-cgg-115 NA non-coding downstream 35167 41407848 ~ 41408132 (+)
trnap-cgg-116 NA non-coding downstream 36068 41408749 ~ 41409089 (+)
trnap-cgg-127 NA non-coding downstream 46327 41419008 ~ 41419424 (+)
trnap-cgg-152 NA non-coding downstream 71545 41444226 ~ 41444783 (+)
LOC110490048 il-1racp other upstream 1241876 40089464 ~ 40132600 (+)
G1291464 NA other upstream 1304703 40067558 ~ 40067907 (+)
G1290614 NA other upstream 2245601 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 2334951 39037005 ~ 39061248 (+)
G1289710 NA other upstream 2772369 38594880 ~ 38600241 (+)
G1293072 NA other downstream 210692 41583216 ~ 41589030 (+)
G1293295 NA other downstream 536353 41909034 ~ 41909611 (+)
G1294319 NA other downstream 1392172 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 2224243 43596924 ~ 43597464 (+)
G1295730 NA other downstream 2543497 43916178 ~ 43916479 (+)

Expression


Co-expression Network