trnap-cgg-85


Basic Information

Item Value
gene id trnap-cgg-85
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 41377035 ~ 41377106 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-cgg-85
ggctcgttggtctaggggtatgattctcgcttcgggtgcgagaggtcccgggttcaaatcccggacgagccc

Function

NR:

description
PREDICTED: serine/threonine-protein kinase Nek3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-cgg-85 True 72 mRNA 0.63 1 41377035 41377106

Neighbor

gene id symbol gene type direction distance location
trnap-cgg-84 NA coding upstream 808 41376156 ~ 41376227 (+)
trnap-cgg-83 NA coding upstream 1683 41375281 ~ 41375352 (+)
trnap-cgg-82 NA coding upstream 2560 41374403 ~ 41374475 (+)
trnap-cgg-81 NA coding upstream 3477 41373487 ~ 41373558 (+)
trnap-cgg-80 NA coding upstream 4354 41372610 ~ 41372681 (+)
trnap-cgg-86 NA coding downstream 804 41377910 ~ 41377983 (+)
trnap-cgg-87 NA coding downstream 1679 41378785 ~ 41378856 (+)
trnap-cgg-88 NA coding downstream 2594 41379700 ~ 41379771 (+)
trnap-cgg-89 NA coding downstream 3469 41380575 ~ 41380646 (+)
trnap-cgg-90 NA coding downstream 4345 41381451 ~ 41381522 (+)
G1292941 NA non-coding upstream 113239 41262368 ~ 41263796 (+)
G1292932 NA non-coding upstream 142016 41234547 ~ 41235019 (+)
G1292922 NA non-coding upstream 151263 41225537 ~ 41225772 (+)
G1292792 NA non-coding upstream 179258 41197095 ~ 41197777 (+)
G1292775 LOC106612405 non-coding upstream 199972 41176206 ~ 41177063 (+)
trnap-cgg-114 NA non-coding downstream 29867 41406973 ~ 41407518 (+)
trnap-cgg-115 NA non-coding downstream 30742 41407848 ~ 41408132 (+)
trnap-cgg-116 NA non-coding downstream 31643 41408749 ~ 41409089 (+)
trnap-cgg-127 NA non-coding downstream 41902 41419008 ~ 41419424 (+)
trnap-cgg-152 NA non-coding downstream 67120 41444226 ~ 41444783 (+)
LOC110490048 il-1racp other upstream 1246301 40089464 ~ 40132600 (+)
G1291464 NA other upstream 1309128 40067558 ~ 40067907 (+)
G1290614 NA other upstream 2250026 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 2339376 39037005 ~ 39061248 (+)
G1289710 NA other upstream 2776794 38594880 ~ 38600241 (+)
G1293072 NA other downstream 206267 41583216 ~ 41589030 (+)
G1293295 NA other downstream 531928 41909034 ~ 41909611 (+)
G1294319 NA other downstream 1387747 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 2219818 43596924 ~ 43597464 (+)
G1295730 NA other downstream 2539072 43916178 ~ 43916479 (+)

Expression


Co-expression Network