trnap-cgg-94


Basic Information

Item Value
gene id trnap-cgg-94
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 41384951 ~ 41385023 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-cgg-94
Gggtcgttggtctaggggtatgattctcgcttcgggtgcgagaggtcccgggttcaaatcccggacgagccca

Function

NR:

description
PREDICTED: serine/threonine-protein kinase Nek3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-cgg-94 True 73 mRNA 0.62 1 41384951 41385023

Neighbor

gene id symbol gene type direction distance location
trnap-cgg-93 NA coding upstream 804 41384076 ~ 41384147 (+)
trnap-cgg-92 NA coding upstream 1679 41383201 ~ 41383272 (+)
trnap-cgg-91 NA coding upstream 2554 41382326 ~ 41382397 (+)
trnap-cgg-90 NA coding upstream 3429 41381451 ~ 41381522 (+)
trnap-cgg-89 NA coding upstream 4305 41380575 ~ 41380646 (+)
trnap-cgg-95 NA coding downstream 804 41385827 ~ 41385898 (+)
trnap-cgg-96 NA coding downstream 1678 41386701 ~ 41386772 (+)
trnap-cgg-97 NA coding downstream 2553 41387576 ~ 41387647 (+)
trnap-cgg-98 NA coding downstream 3427 41388450 ~ 41388521 (+)
trnap-cgg-99 NA coding downstream 4302 41389325 ~ 41389396 (+)
G1292944 NA non-coding upstream 39 41288904 ~ 41384912 (+)
trnap-cgg-68 NA non-coding upstream 3183 41360807 ~ 41381768 (+)
G1292941 NA non-coding upstream 121155 41262368 ~ 41263796 (+)
G1292932 NA non-coding upstream 149932 41234547 ~ 41235019 (+)
G1292922 NA non-coding upstream 159179 41225537 ~ 41225772 (+)
trnap-cgg-114 NA non-coding downstream 21950 41406973 ~ 41407518 (+)
trnap-cgg-115 NA non-coding downstream 22825 41407848 ~ 41408132 (+)
trnap-cgg-116 NA non-coding downstream 23726 41408749 ~ 41409089 (+)
trnap-cgg-127 NA non-coding downstream 33985 41419008 ~ 41419424 (+)
trnap-cgg-152 NA non-coding downstream 59203 41444226 ~ 41444783 (+)
LOC110490048 il-1racp other upstream 1254217 40089464 ~ 40132600 (+)
G1291464 NA other upstream 1317044 40067558 ~ 40067907 (+)
G1290614 NA other upstream 2257942 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 2347292 39037005 ~ 39061248 (+)
G1289710 NA other upstream 2784710 38594880 ~ 38600241 (+)
G1293072 NA other downstream 198350 41583216 ~ 41589030 (+)
G1293295 NA other downstream 524011 41909034 ~ 41909611 (+)
G1294319 NA other downstream 1379830 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 2211901 43596924 ~ 43597464 (+)
G1295730 NA other downstream 2531155 43916178 ~ 43916479 (+)

Expression


Co-expression Network