trnap-cgg-101


Basic Information

Item Value
gene id trnap-cgg-101
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 41391072 ~ 41391143 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-cgg-101
ggctcgttggtctaggggtatgattctcgcttcgggtgcgagaggtcccgggttcaaatcctggacgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-cgg-101 True 72 mRNA 0.61 1 41391072 41391143

Neighbor

gene id symbol gene type direction distance location
trnap-cgg-100 NA coding upstream 802 41390199 ~ 41390270 (+)
trnap-cgg-99 NA coding upstream 1676 41389325 ~ 41389396 (+)
trnap-cgg-98 NA coding upstream 2551 41388450 ~ 41388521 (+)
trnap-cgg-97 NA coding upstream 3425 41387576 ~ 41387647 (+)
trnap-cgg-96 NA coding upstream 4300 41386701 ~ 41386772 (+)
trnap-cgg-102 NA coding downstream 804 41391947 ~ 41392018 (+)
trnap-cgg-103 NA coding downstream 2551 41393694 ~ 41393765 (+)
trnap-cgg-104 NA coding downstream 3465 41394608 ~ 41394679 (+)
trnap-cgg-105 NA coding downstream 4339 41395482 ~ 41395553 (+)
trnap-cgg-106 NA coding downstream 5213 41396356 ~ 41396427 (+)
G1292939 NA non-coding upstream 5898 41258881 ~ 41385174 (+)
G1292944 NA non-coding upstream 6160 41288904 ~ 41384912 (+)
trnap-cgg-68 NA non-coding upstream 9304 41360807 ~ 41381768 (+)
G1292941 NA non-coding upstream 127276 41262368 ~ 41263796 (+)
G1292932 NA non-coding upstream 156053 41234547 ~ 41235019 (+)
trnap-cgg-114 NA non-coding downstream 15830 41406973 ~ 41407518 (+)
trnap-cgg-115 NA non-coding downstream 16705 41407848 ~ 41408132 (+)
trnap-cgg-116 NA non-coding downstream 17606 41408749 ~ 41409089 (+)
trnap-cgg-127 NA non-coding downstream 27865 41419008 ~ 41419424 (+)
trnap-cgg-152 NA non-coding downstream 53083 41444226 ~ 41444783 (+)
LOC110490048 il-1racp other upstream 1260338 40089464 ~ 40132600 (+)
G1291464 NA other upstream 1323165 40067558 ~ 40067907 (+)
G1290614 NA other upstream 2264063 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 2353413 39037005 ~ 39061248 (+)
G1289710 NA other upstream 2790831 38594880 ~ 38600241 (+)
G1293072 NA other downstream 192230 41583216 ~ 41589030 (+)
G1293295 NA other downstream 517891 41909034 ~ 41909611 (+)
G1294319 NA other downstream 1373710 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 2205781 43596924 ~ 43597464 (+)
G1295730 NA other downstream 2525035 43916178 ~ 43916479 (+)

Expression


Co-expression Network