trnap-cgg-118


Basic Information

Item Value
gene id trnap-cgg-118
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 41410556 ~ 41410627 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-cgg-118
ggctcgttggtctaggggtatgattcttgctTCGGGTgtgagaggtcctgggttcaaatcccggacgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-cgg-118 True 72 mRNA 0.58 1 41410556 41410627

Neighbor

gene id symbol gene type direction distance location
trnap-cgg-117 NA coding upstream 805 41409680 ~ 41409751 (+)
trnap-cgg-116 NA coding upstream 1644 41408749 ~ 41409089 (+)
trnap-cgg-115 NA coding upstream 2519 41407848 ~ 41408132 (+)
trnap-cgg-114 NA coding upstream 3394 41406973 ~ 41407518 (+)
trnap-cgg-113 NA coding upstream 4269 41406215 ~ 41406287 (+)
trnap-cgg-119 NA coding downstream 792 41411419 ~ 41411490 (+)
trnap-cgg-120 NA coding downstream 2531 41413158 ~ 41413229 (+)
trnap-cgg-121 NA coding downstream 3370 41413997 ~ 41414068 (+)
trnap-cgg-122 NA coding downstream 4246 41414873 ~ 41414944 (+)
trnap-cgg-123 NA coding downstream 5122 41415749 ~ 41415820 (+)
G1292944 NA non-coding upstream 25644 41288904 ~ 41384912 (+)
trnap-cgg-127 NA non-coding downstream 8381 41419008 ~ 41419424 (+)
trnap-cgg-152 NA non-coding downstream 33599 41444226 ~ 41444783 (+)
G1293019 NA non-coding downstream 99560 41510187 ~ 41510710 (+)
G1293020 NA non-coding downstream 101448 41512075 ~ 41512941 (+)
G1293025 NA non-coding downstream 117843 41528470 ~ 41529058 (+)
LOC110490048 il-1racp other upstream 1279822 40089464 ~ 40132600 (+)
G1291464 NA other upstream 1342649 40067558 ~ 40067907 (+)
G1290614 NA other upstream 2283547 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 2372897 39037005 ~ 39061248 (+)
G1289710 NA other upstream 2810315 38594880 ~ 38600241 (+)
G1293072 NA other downstream 172746 41583216 ~ 41589030 (+)
G1293295 NA other downstream 498407 41909034 ~ 41909611 (+)
G1294319 NA other downstream 1354226 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 2186297 43596924 ~ 43597464 (+)
G1295730 NA other downstream 2505551 43916178 ~ 43916479 (+)

Expression


Co-expression Network