trnap-cgg-125


Basic Information

Item Value
gene id trnap-cgg-125
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 41417501 ~ 41417572 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-cgg-125
ggctcgttggtctaggggtatgattcttgtttcgggtgcgagaggtcctgggttcaaatcccggacgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-cgg-125 True 72 mRNA 0.58 1 41417501 41417572

Neighbor

gene id symbol gene type direction distance location
trnap-cgg-124 NA coding upstream 805 41416625 ~ 41416696 (+)
trnap-cgg-123 NA coding upstream 1681 41415749 ~ 41415820 (+)
trnap-cgg-122 NA coding upstream 2557 41414873 ~ 41414944 (+)
trnap-cgg-121 NA coding upstream 3433 41413997 ~ 41414068 (+)
trnap-cgg-120 NA coding upstream 4272 41413158 ~ 41413229 (+)
trnap-cgg-126 NA coding downstream 804 41418376 ~ 41418447 (+)
trnap-cgg-127 NA coding downstream 1679 41419008 ~ 41419424 (+)
trnap-cgg-128 NA coding downstream 2554 41420126 ~ 41420197 (+)
trnap-cgg-129 NA coding downstream 3429 41421001 ~ 41421072 (+)
trnap-cgg-130 NA coding downstream 4304 41421876 ~ 41421947 (+)
trnap-cgg-116 NA non-coding upstream 8412 41408749 ~ 41409089 (+)
trnap-cgg-115 NA non-coding upstream 9369 41407848 ~ 41408132 (+)
trnap-cgg-114 NA non-coding upstream 9983 41406973 ~ 41407518 (+)
G1292944 NA non-coding upstream 32589 41288904 ~ 41384912 (+)
trnap-cgg-152 NA non-coding downstream 26654 41444226 ~ 41444783 (+)
G1293019 NA non-coding downstream 92615 41510187 ~ 41510710 (+)
G1293020 NA non-coding downstream 94503 41512075 ~ 41512941 (+)
G1293025 NA non-coding downstream 110898 41528470 ~ 41529058 (+)
LOC110490048 il-1racp other upstream 1286767 40089464 ~ 40132600 (+)
G1291464 NA other upstream 1349594 40067558 ~ 40067907 (+)
G1290614 NA other upstream 2290492 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 2379842 39037005 ~ 39061248 (+)
G1289710 NA other upstream 2817260 38594880 ~ 38600241 (+)
G1293072 NA other downstream 165801 41583216 ~ 41589030 (+)
G1293295 NA other downstream 491462 41909034 ~ 41909611 (+)
G1294319 NA other downstream 1347281 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 2179352 43596924 ~ 43597464 (+)
G1295730 NA other downstream 2498606 43916178 ~ 43916479 (+)

Expression


Co-expression Network