trnap-cgg-130


Basic Information

Item Value
gene id trnap-cgg-130
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 41421876 ~ 41421947 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-cgg-130
ggctcgttggtctagggttatgattctcgcttcgggtgcgagaagtcccgggttcaaatcccggatgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-cgg-130 True 72 mRNA 0.58 1 41421876 41421947

Neighbor

gene id symbol gene type direction distance location
trnap-cgg-129 NA coding upstream 804 41421001 ~ 41421072 (+)
trnap-cgg-128 NA coding upstream 1679 41420126 ~ 41420197 (+)
trnap-cgg-127 NA coding upstream 2554 41419008 ~ 41419424 (+)
trnap-cgg-126 NA coding upstream 3429 41418376 ~ 41418447 (+)
trnap-cgg-125 NA coding upstream 4304 41417501 ~ 41417572 (+)
trnap-cgg-131 NA coding downstream 804 41422751 ~ 41422822 (+)
trnap-cgg-132 NA coding downstream 1679 41423626 ~ 41423697 (+)
trnap-cgg-133 NA coding downstream 3403 41425350 ~ 41425421 (+)
trnap-cgg-134 NA coding downstream 4278 41426225 ~ 41426296 (+)
trnap-cgg-135 NA coding downstream 6028 41427975 ~ 41428046 (+)
trnap-cgg-116 NA non-coding upstream 12787 41408749 ~ 41409089 (+)
trnap-cgg-115 NA non-coding upstream 13744 41407848 ~ 41408132 (+)
trnap-cgg-114 NA non-coding upstream 14358 41406973 ~ 41407518 (+)
trnap-cgg-68 NA non-coding upstream 40108 41360807 ~ 41381768 (+)
trnap-cgg-152 NA non-coding downstream 22279 41444226 ~ 41444783 (+)
G1293019 NA non-coding downstream 88240 41510187 ~ 41510710 (+)
G1293020 NA non-coding downstream 90128 41512075 ~ 41512941 (+)
G1293025 NA non-coding downstream 106523 41528470 ~ 41529058 (+)
G1293027 NA non-coding downstream 107220 41529167 ~ 41529827 (+)
LOC110490048 il-1racp other upstream 1291142 40089464 ~ 40132600 (+)
G1291464 NA other upstream 1353969 40067558 ~ 40067907 (+)
G1290614 NA other upstream 2294867 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 2384217 39037005 ~ 39061248 (+)
G1289710 NA other upstream 2821635 38594880 ~ 38600241 (+)
G1293072 NA other downstream 161426 41583216 ~ 41589030 (+)
G1293295 NA other downstream 487087 41909034 ~ 41909611 (+)
G1294319 NA other downstream 1342906 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 2174977 43596924 ~ 43597464 (+)
G1295730 NA other downstream 2494231 43916178 ~ 43916479 (+)

Expression


Co-expression Network