trnap-cgg-139


Basic Information

Item Value
gene id trnap-cgg-139
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 41432195 ~ 41432266 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-cgg-139
ggctcgttggtctaggggtatgattctcgcttcgggtgcgagaggtcccgggttcaaatcccggacgagcca

Function

NR:

description
PREDICTED: serine/threonine-protein kinase Nek3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-cgg-139 True 72 mRNA 0.61 1 41432195 41432266

Neighbor

gene id symbol gene type direction distance location
trnap-cgg-138 NA coding upstream 768 41431356 ~ 41431427 (+)
trnap-cgg-137 NA coding upstream 2452 41429672 ~ 41429743 (+)
trnap-cgg-136 NA coding upstream 3310 41428814 ~ 41428885 (+)
trnap-cgg-135 NA coding upstream 4149 41427975 ~ 41428046 (+)
trnap-cgg-134 NA coding upstream 5899 41426225 ~ 41426296 (+)
trnap-ugg-65 NA coding downstream 777 41433043 ~ 41433114 (+)
trnap-cgg-140 NA coding downstream 1616 41433882 ~ 41433953 (+)
trnap-cgg-141 NA coding downstream 2474 41434740 ~ 41434811 (+)
trnap-cgg-142 NA coding downstream 3348 41435614 ~ 41435685 (+)
trnap-cgg-143 NA coding downstream 4208 41436474 ~ 41436545 (+)
trnap-cgg-127 NA non-coding upstream 12771 41419008 ~ 41419424 (+)
trnap-cgg-116 NA non-coding upstream 23106 41408749 ~ 41409089 (+)
trnap-cgg-115 NA non-coding upstream 24063 41407848 ~ 41408132 (+)
trnap-cgg-114 NA non-coding upstream 24677 41406973 ~ 41407518 (+)
trnap-cgg-68 NA non-coding upstream 50427 41360807 ~ 41381768 (+)
trnap-cgg-152 NA non-coding downstream 11960 41444226 ~ 41444783 (+)
G1293019 NA non-coding downstream 77921 41510187 ~ 41510710 (+)
G1293020 NA non-coding downstream 79809 41512075 ~ 41512941 (+)
G1293025 NA non-coding downstream 96204 41528470 ~ 41529058 (+)
G1293027 NA non-coding downstream 96901 41529167 ~ 41529827 (+)
LOC110490048 il-1racp other upstream 1301461 40089464 ~ 40132600 (+)
G1291464 NA other upstream 1364288 40067558 ~ 40067907 (+)
G1290614 NA other upstream 2305186 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 2394536 39037005 ~ 39061248 (+)
G1289710 NA other upstream 2831954 38594880 ~ 38600241 (+)
G1293072 NA other downstream 151107 41583216 ~ 41589030 (+)
G1293295 NA other downstream 476768 41909034 ~ 41909611 (+)
G1294319 NA other downstream 1332587 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 2164658 43596924 ~ 43597464 (+)
G1295730 NA other downstream 2483912 43916178 ~ 43916479 (+)

Expression


Co-expression Network