trnap-cgg-143


Basic Information

Item Value
gene id trnap-cgg-143
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 41436474 ~ 41436545 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-cgg-143
ggctcgttggtctaggggtatgattctcgcttcgggtgcgagaggtcccgggttcaaatcccggacgagccc

Function

NR:

description
PREDICTED: serine/threonine-protein kinase Nek3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-cgg-143 True 72 mRNA 0.63 1 41436474 41436545

Neighbor

gene id symbol gene type direction distance location
trnap-cgg-142 NA coding upstream 789 41435614 ~ 41435685 (+)
trnap-cgg-141 NA coding upstream 1663 41434740 ~ 41434811 (+)
trnap-cgg-140 NA coding upstream 2521 41433882 ~ 41433953 (+)
trnap-ugg-65 NA coding upstream 3360 41433043 ~ 41433114 (+)
trnap-cgg-139 NA coding upstream 4208 41432195 ~ 41432266 (+)
trnap-cgg-144 NA coding downstream 791 41437336 ~ 41437407 (+)
trnap-cgg-145 NA coding downstream 1653 41438198 ~ 41438269 (+)
trnap-cgg-146 NA coding downstream 2568 41439113 ~ 41439184 (+)
trnap-cgg-147 NA coding downstream 3442 41439987 ~ 41440058 (+)
trnap-cgg-148 NA coding downstream 4302 41440847 ~ 41440918 (+)
trnap-cgg-127 NA non-coding upstream 17050 41419008 ~ 41419424 (+)
trnap-cgg-116 NA non-coding upstream 27385 41408749 ~ 41409089 (+)
trnap-cgg-115 NA non-coding upstream 28342 41407848 ~ 41408132 (+)
trnap-cgg-114 NA non-coding upstream 28956 41406973 ~ 41407518 (+)
trnap-cgg-68 NA non-coding upstream 54706 41360807 ~ 41381768 (+)
trnap-cgg-152 NA non-coding downstream 7681 41444226 ~ 41444783 (+)
G1293019 NA non-coding downstream 73642 41510187 ~ 41510710 (+)
G1293020 NA non-coding downstream 75530 41512075 ~ 41512941 (+)
G1293025 NA non-coding downstream 91925 41528470 ~ 41529058 (+)
G1293027 NA non-coding downstream 92622 41529167 ~ 41529827 (+)
LOC110490048 il-1racp other upstream 1305740 40089464 ~ 40132600 (+)
G1291464 NA other upstream 1368567 40067558 ~ 40067907 (+)
G1290614 NA other upstream 2309465 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 2398815 39037005 ~ 39061248 (+)
G1289710 NA other upstream 2836233 38594880 ~ 38600241 (+)
G1293072 NA other downstream 146828 41583216 ~ 41589030 (+)
G1293295 NA other downstream 472489 41909034 ~ 41909611 (+)
G1294319 NA other downstream 1328308 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 2160379 43596924 ~ 43597464 (+)
G1295730 NA other downstream 2479633 43916178 ~ 43916479 (+)

Expression


Co-expression Network