trnap-agg-153


Basic Information

Item Value
gene id trnap-agg-153
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 41447038 ~ 41447109 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-agg-153
ggctcgttggtctaggggtatgattctcgcttagggtgcgagaggtcccgggttcaaatcccggacgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-agg-153 True 72 mRNA 0.61 1 41447038 41447109

Neighbor

gene id symbol gene type direction distance location
trnap-cgg-154 NA coding upstream 830 41446137 ~ 41446208 (+)
trnap-cgg-153 NA coding upstream 1731 41445236 ~ 41445307 (+)
trnap-cgg-152 NA coding upstream 2632 41444226 ~ 41444783 (+)
trnap-cgg-151 NA coding upstream 3494 41443473 ~ 41443544 (+)
trnap-cgg-150 NA coding upstream 4396 41442571 ~ 41442642 (+)
trnap-agg-154 NA coding downstream 830 41447939 ~ 41448010 (+)
trnap-cgg-155 NA coding downstream 1731 41448840 ~ 41448911 (+)
trnap-cgg-156 NA coding downstream 2632 41449741 ~ 41449812 (+)
trnap-cgg-157 NA coding downstream 3533 41450642 ~ 41450713 (+)
trnap-cgg-158 NA coding downstream 4434 41451543 ~ 41451614 (+)
trnap-cgg-127 NA non-coding upstream 27614 41419008 ~ 41419424 (+)
trnap-cgg-116 NA non-coding upstream 37949 41408749 ~ 41409089 (+)
trnap-cgg-115 NA non-coding upstream 38906 41407848 ~ 41408132 (+)
trnap-cgg-114 NA non-coding upstream 39520 41406973 ~ 41407518 (+)
G1293019 NA non-coding downstream 63078 41510187 ~ 41510710 (+)
G1293020 NA non-coding downstream 64966 41512075 ~ 41512941 (+)
G1293025 NA non-coding downstream 81361 41528470 ~ 41529058 (+)
G1293027 NA non-coding downstream 82058 41529167 ~ 41529827 (+)
trnap-cgg-205 NA non-coding downstream 86171 41533280 ~ 41533841 (+)
LOC110490048 il-1racp other upstream 1316304 40089464 ~ 40132600 (+)
G1291464 NA other upstream 1379131 40067558 ~ 40067907 (+)
G1290614 NA other upstream 2320029 39126272 ~ 39127009 (+)
G1290549 LOC106590036 other upstream 2409379 39037005 ~ 39061248 (+)
G1289710 NA other upstream 2846797 38594880 ~ 38600241 (+)
G1293072 NA other downstream 136264 41583216 ~ 41589030 (+)
G1293295 NA other downstream 461925 41909034 ~ 41909611 (+)
G1294319 NA other downstream 1317744 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 2149815 43596924 ~ 43597464 (+)
G1295730 NA other downstream 2469069 43916178 ~ 43916479 (+)

Expression


Co-expression Network