Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110490073 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 41583335 ~ 41588120 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: stress-associated endoplasmic reticulum protein 1 |
| id | name | namespace |
|---|---|---|
| GO:0005783 | endoplasmic reticulum | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021563215.2 | True | 1057 | mRNA | 0.41 | 3 | 41583335 | 41588120 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490071 | clrn1 | coding | upstream | 15484 | 41557648 ~ 41567851 (+) |
| trnap-cgg-207 | NA | coding | upstream | 45840 | 41537424 ~ 41537495 (+) |
| trnap-cgg-206 | NA | coding | upstream | 47643 | 41535621 ~ 41535692 (+) |
| trnap-cgg-205 | NA | coding | upstream | 49494 | 41533280 ~ 41533841 (+) |
| trnap-cgg-204 | NA | coding | upstream | 55634 | 41527630 ~ 41527701 (+) |
| LOC110490072 | LOC106612410 | coding | downstream | 343 | 41588463 ~ 41625040 (+) |
| iqcg | iqcg | coding | downstream | 222123 | 41810243 ~ 41836130 (+) |
| LOC110490081 | LOC106580643 | coding | downstream | 337054 | 41925174 ~ 41951832 (+) |
| LOC118938919 | NA | coding | downstream | 431356 | 42019476 ~ 42023326 (+) |
| LOC110490085 | LOC106612498 | coding | downstream | 451834 | 42039954 ~ 42054610 (+) |
| G1293084 | NA | non-coding | upstream | 5119 | 41577829 ~ 41578216 (+) |
| G1293056 | NA | non-coding | upstream | 29387 | 41553534 ~ 41553948 (+) |
| G1293045 | NA | non-coding | upstream | 37713 | 41544898 ~ 41545622 (+) |
| G1293027 | NA | non-coding | upstream | 53508 | 41529167 ~ 41529827 (+) |
| G1293089 | NA | non-coding | downstream | 3898 | 41592018 ~ 41592641 (+) |
| G1293079 | NA | non-coding | downstream | 22013 | 41610133 ~ 41610840 (+) |
| G1293074 | NA | non-coding | downstream | 36941 | 41625061 ~ 41626045 (+) |
| G1293077 | NA | non-coding | downstream | 38002 | 41626122 ~ 41626379 (+) |
| G1293169 | NA | non-coding | downstream | 145356 | 41733476 ~ 41735494 (+) |
| LOC110490048 | il-1racp | other | upstream | 1452601 | 40089464 ~ 40132600 (+) |
| G1291464 | NA | other | upstream | 1515428 | 40067558 ~ 40067907 (+) |
| G1290614 | NA | other | upstream | 2456326 | 39126272 ~ 39127009 (+) |
| G1290549 | LOC106590036 | other | upstream | 2545676 | 39037005 ~ 39061248 (+) |
| G1289710 | NA | other | upstream | 2983094 | 38594880 ~ 38600241 (+) |
| G1293295 | NA | other | downstream | 320914 | 41909034 ~ 41909611 (+) |
| G1294319 | NA | other | downstream | 1176733 | 42764853 ~ 42767937 (+) |
| G1295348 | LOC106602853 | other | downstream | 2008804 | 43596924 ~ 43597464 (+) |
| G1295730 | NA | other | downstream | 2328058 | 43916178 ~ 43916479 (+) |
| G1295845 | NA | other | downstream | 2441316 | 44029436 ~ 44029861 (+) |
