trnaa-ugc-71


Basic Information

Item Value
gene id trnaa-ugc-71
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 42326311 ~ 42326382 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnaa-ugc-71
ggggatgtagctcagtggtagagcgcatgctttgcatgtatgaggtcctgggttcaatccccagcttctcca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnaa-ugc-71 True 72 mRNA 0.54 1 42326311 42326382

Neighbor

gene id symbol gene type direction distance location
trnaa-ugc-70 NA coding upstream 852 42325388 ~ 42325459 (+)
trnaa-ugc-69 NA coding upstream 1774 42324466 ~ 42324537 (+)
trnat-ugu-37 NA coding upstream 2696 42323544 ~ 42323615 (+)
trnaa-ugc-68 NA coding upstream 4194 42322046 ~ 42322117 (+)
LOC110490086 LOC106612440 coding upstream 71298 42154291 ~ 42255013 (+)
trnaa-ugc-72 NA coding downstream 852 42327234 ~ 42327305 (+)
trnaa-ugc-73 NA coding downstream 1775 42328157 ~ 42328228 (+)
trnaa-ugc-74 NA coding downstream 2662 42329044 ~ 42329115 (+)
trnaa-ugc-75 NA coding downstream 3584 42329966 ~ 42330037 (+)
trnaa-ugc-76 NA coding downstream 4506 42330888 ~ 42330959 (+)
G1293979 NA non-coding upstream 2974 42321591 ~ 42323337 (+)
G1293974 NA non-coding upstream 21758 42304297 ~ 42304553 (+)
G1293798 NA non-coding upstream 69146 42256868 ~ 42257165 (+)
G1293769 NA non-coding upstream 124408 42201430 ~ 42201903 (+)
G1293637 NA non-coding upstream 256362 42069660 ~ 42069949 (+)
trnaa-ugc-118 NA non-coding downstream 45423 42371805 ~ 42383605 (+)
G1294052 NA non-coding downstream 123093 42449475 ~ 42449737 (+)
G1294276 NA non-coding downstream 231008 42557390 ~ 42568776 (+)
G1294336 NA non-coding downstream 318632 42645014 ~ 42645230 (+)
G1294325 NA non-coding downstream 357242 42683624 ~ 42684414 (+)
G1293295 NA other upstream 416700 41909034 ~ 41909611 (+)
G1293072 NA other upstream 738167 41583216 ~ 41589030 (+)
LOC110490048 il-1racp other upstream 2195577 40089464 ~ 40132600 (+)
G1291464 NA other upstream 2258404 40067558 ~ 40067907 (+)
G1290614 NA other upstream 3199302 39126272 ~ 39127009 (+)
G1294319 NA other downstream 438471 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 1270542 43596924 ~ 43597464 (+)
G1295730 NA other downstream 1589796 43916178 ~ 43916479 (+)
G1295845 NA other downstream 1703054 44029436 ~ 44029861 (+)
cblb cblb other downstream 1995121 44173352 ~ 44326246 (+)

Expression


Co-expression Network