tpst1l (tpst1)


Basic Information

Item Value
gene id tpst1l
gene name tpst1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 42528504 ~ 42545974 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021563249.2
TGTGGGACTGCCTTTATGGCAACTGTTCCGTACACCGTCAGTGGAGTCAAACGATTGCATCCGGTCTTTAGGAGGAATGGAAAGACAGCATGTGATGTTACTTTTGGACGTTATTAACATCCATTTAACAAGGGCaaactccatcttaactcctcctacACGTTTATtcgattggttgaacagtgcaaaAGAGAACCTCCCCGATAGTTATTTTCTCTCGTCAGGATCAGAAATTACACAATACAACGGACCTTTCTTTTTCAGAGACTGATTCTCCGCAGTTAAGgTCCAGTATGGTGGATCAAGGATATGTACAGGGCTGGCACCCAGCTGGAAAGGACCCCTCTCAGAGCCACCTGGGGGGGTCCTAGACCGCCAGCAACGACGGGTCTCTACGTTATTTTCTACCCAAAGGCCTCAGTCACTCTCCCTTGCCCCTCTCTCAACCCTCTAGGTCTCAACCCACAGATTTTATACCAAATCATACCCCAAGCTCTTACTCTTAACTCCAGTCCACAGCCCATAAACCTCCAGTCTAACTGACCATGAGGGGACAGAAGGTGAGCATGTTATTGGGCTGTGCTCTCCTCTGTTccgcctctctcctctacctgggCCTGAGTGGCATCGACTGCCCTCCCCCTGACCACGCCCACCGCCATACCTGGGCAGATGCCCACCTGGGCTCCACCAATCAGAGCCAAGCATCTCCCATTTACTATGGCGAGGACACACCCCTCATTTTCATTGGTGGGTTCCCTCGGAGCGGCACCACACTGATGCGGGCCATGCTGGATGCCCACAATGCAGTGCGTTGCGGGGAGGAGACACGGGTGATCCCGCGTCTTCTTGCGATGCGTGCCACCTGGAGTCGCTCGGCCAGAGAGCGGGTCAGACTGGATGAGGCCGGGGTCACTGACCAGGTGTTGGACTCAGCAGTGCGGGCGTTCTTACTGGAGGTAATAATAGGTCATGGTGAGCCAGCAGCCAGGCTCTGTAACAAGGATCCATTTGCTCTGAAGTCTCTGTCCTACCTGGCCCGTATTTTCCCCCAGGCCAAGTTTGTTCTCATGCTACGGGATGGAAGGGCTACCGTCCACTCCATGATCTCACGCAAGGTGACCATCTCTGGTTTTGACCTGACTAGTTACAGGGACTGTCTAACTAAGTGGAGCCGTGCGGTGGAGGGCATGTACTCCCAGTGCCAGGGGGCGCCTGAGGGCAGCTGTCTGCCTGTGCGCTACGAGCAGCTGGTACTGCACCCAGAGGTAGAGATGAGGAAGCTGCTGAGCTTCCTGGGGTTGCCATGGGACCCGGCCGTGCTACACCACGAAGACCTTATTGGCAAGGCCGGCGGTGTGTCGCTGTCCAAAGTGGAGCGGTCCACAGACCAGGTTGTGAACCCTGTAAACACAGACGCCCTGTCTAAGTGGGTGGGTCACATCCCCTCTGATGTGCTGCGTGAGATGCATGACATCGCCCCCATGCTCGCCCGCCTCGGCTACGACCCCCTGGCAAACCCCCCAGACTACGCCCGGCCAGACCCCATCATAGCCCCCAACAACTACACACTGCTTCAGAGAACAGAAACCCTACATCCCAGTTAGGTGGAAAAAGAGGAGGAGGTAAACACAAGGCACTTTGGACATTCTAGAACCCTCTCCAGTTCCACATTCCATGCTCCTTTCCCATTGGCTCTCAGCCCACCATCAACCCCACTAAAGAGGATTCTAAACTGCATCTGTGTTTTTGCATAGGCCACCGTGACTGTTAGCCTATGTTGTGTTATTTGAGGGTAATGAGGGCATCAAATATGGATCAGTTTATTGCTCCACAATTCTGTGGGACAGTGGATGCCACTGTGTGGGAACTCCGGTGCCTCTTCCCTTGACTCATTCTCAGGAAAGTCCCCTGTCTGAaactctgcctcctctccctccacctagCCCTCCATGTACCAATAGTGTTGCAGTGTAAAGTGATTTTGTCCAACAATTGATGAACCTGATACCATTTCAATGTTTCTTATTAACTTCCTGTCACTCATCCAAAATCTGTGAACATGCTTTTGGAAAGatctgtgagagtgtgtgtgtgtgtgtaagtaggcatacatttatatttttcaaGATGTCATGTTTATTTTCTTAATAAATTATTTTGTTGGAGCATTCATTCAGTATTAGTTTGTAGCTTGTTTTGTCGAAATAAATAAGGCAAATCACTGTATAGCAA
>XM_036944387.1
GGGACTGCCTTTATGGCAACTGTTCCGTACACCGTCAGTGGAGTCAAACGATTGCATCCGGTCTTTAGGAGGAATGGAAAGACAGCATGTGATGTTACTTTTGGACGTTATTAACATCCATTTAACAAGGGCaaactccatcttaactcctcctacACGTTTATtcgattggttgaacagtgcaaaAGAGAACCTCCCCGATAGTTATTTTCTCTCGTCAGGATCAGAAATTACACAATACAACGGACCTTTCTTTTTCAGAGACTGATTCTCCGCAGTTAAGATATCCATCCGCTTCCCCTATAGCAATCCTGTGATCTCCTCCcgtccacccaacacattccaaagccatctgTCTTTCTACGGAGACCCATTACCTCCTGACATAAAAcagaaaggggtctgaatactttccaaatgTCCAGTATGGTGGATCAAGGATATGTACAGGGCTGGCACCCAGCTGGAAAGGACCCCTCTCAGAGCCACCTGGGGGGGTCCTAGACCGCCAGCAACGACGGGTCTCTACGTTATTTTCTACCCAAAGGCCTCAGTCACTCTCCCTTGCCCCTCTCTCAACCCTCTAGGTCTCAACCCACAGATTTTATACCAAATCATACCCCAAGCTCTTACTCTTAACTCCAGTCCACAGCCCATAAACCTCCAGTCTAACTGACCATGAGGGGACAGAAGGTGAGCATGTTATTGGGCTGTGCTCTCCTCTGTTccgcctctctcctctacctgggCCTGAGTGGCATCGACTGCCCTCCCCCTGACCACGCCCACCGCCATACCTGGGCAGATGCCCACCTGGGCTCCACCAATCAGAGCCAAGCATCTCCCATTTACTATGGCGAGGACACACCCCTCATTTTCATTGGTGGGTTCCCTCGGAGCGGCACCACACTGATGCGGGCCATGCTGGATGCCCACAATGCAGTGCGTTGCGGGGAGGAGACACGGGTGATCCCGCGTCTTCTTGCGATGCGTGCCACCTGGAGTCGCTCGGCCAGAGAGCGGGTCAGACTGGATGAGGCCGGGGTCACTGACCAGGTGTTGGACTCAGCAGTGCGGGCGTTCTTACTGGAGGTAATAATAGGTCATGGTGAGCCAGCAGCCAGGCTCTGTAACAAGGATCCATTTGCTCTGAAGTCTCTGTCCTACCTGGCCCGTATTTTCCCCCAGGCCAAGTTTGTTCTCATGCTACGGGATGGAAGGGCTACCGTCCACTCCATGATCTCACGCAAGGTGACCATCTCTGGTTTTGACCTGACTAGTTACAGGGACTGTCTAACTAAGTGGAGCCGTGCGGTGGAGGGCATGTACTCCCAGTGCCAGGGGGCGCCTGAGGGCAGCTGTCTGCCTGTGCGCTACGAGCAGCTGGTACTGCACCCAGAGGTAGAGATGAGGAAGCTGCTGAGCTTCCTGGGGTTGCCATGGGACCCGGCCGTGCTACACCACGAAGACCTTATTGGCAAGGCCGGCGGTGTGTCGCTGTCCAAAGTGGAGCGGTCCACAGACCAGGTTGTGAACCCTGTAAACACAGACGCCCTGTCTAAGTGGGTGGGTCACATCCCCTCTGATGTGCTGCGTGAGATGCATGACATCGCCCCCATGCTCGCCCGCCTCGGCTACGACCCCCTGGCAAACCCCCCAGACTACGCCCGGCCAGACCCCATCATAGCCCCCAACAACTACACACTGCTTCAGAGAACAGAAACCCTACATCCCAGTTAGGTGGAAAAAGAGGAGGAGGTAAACACAAGGCACTTTGGACATTCTAGAACCCTCTCCAGTTCCACATTCCATGCTCCTTTCCCATTGGCTCTCAGCCCACCATCAACCCCACTAAAGAGGATTCTAAACTGCATCTGTGTTTTTGCATAGGCCACCGTGACTGTTAGCCTATGTTGTGTTATTTGAGGGTAATGAGGGCATCAAATATGGATCAGTTTATTGCTCCACAATTCTGTGGGACAGTGGATGCCACTGTGTGGGAACTCCGGTGCCTCTTCCCTTGACTCATTCTCAGGAAAGTCCCCTGTCTGAaactctgcctcctctccctccacctagCCCTCCATGTACCAATAGTGTTGCAGTGTAAAGTGATTTTGTCCAACAATTGATGAACCTGATACCATTTCAATGTTTCTTATTAACTTCCTGTCACTCATCCAAAATCTGTGAACATGCTTTTGGAAAGatctgtgagagtgtgtgtgtgtgtgtaagtaggcatacatttatatttttcaaGATGTCATGTTTATTTTCTTAATAAATTATTTTGTTGGAGCATTCATTCAGTATTAGTTTGTAGCTTGTTTTGTCGAAATAAATAAGGCAAATCACTGTATAGCAA
>XM_036944386.1
AACACCGCTCAGGCGTTTCTTTTAAGAATGCTGAATTACTGTCCATATGTTGTGTTGTACGATAGTAGATACGGCTGAACCTCAGACTGGTGACAAGACAACACCATAGTTAAACTCGTTTAAATTACACAATTTATCTTGTTTGAGCGGCTTGTGTTGAAGTTGACAGTTTCCTCTATTTTGCAGTTACACAATACAACGGACCTTTCTTTTTCAGAGACTGATTCTCCGCAGTTAAGATATCCATCCGCTTCCCCTATAGCAATCCTGTGATCTCCTCCcgtccacccaacacattccaaagccatctgTCTTTCTACGGAGACCCATTACCTCCTGACATAAAAcagaaaggggTCCAGTATGGTGGATCAAGGATATGTACAGGGCTGGCACCCAGCTGGAAAGGACCCCTCTCAGAGCCACCTGGGGGGGTCCTAGACCGCCAGCAACGACGGGTCTCTACGTTATTTTCTACCCAAAGGCCTCAGTCACTCTCCCTTGCCCCTCTCTCAACCCTCTAGGTCTCAACCCACAGATTTTATACCAAATCATACCCCAAGCTCTTACTCTTAACTCCAGTCCACAGCCCATAAACCTCCAGTCTAACTGACCATGAGGGGACAGAAGGTGAGCATGTTATTGGGCTGTGCTCTCCTCTGTTccgcctctctcctctacctgggCCTGAGTGGCATCGACTGCCCTCCCCCTGACCACGCCCACCGCCATACCTGGGCAGATGCCCACCTGGGCTCCACCAATCAGAGCCAAGCATCTCCCATTTACTATGGCGAGGACACACCCCTCATTTTCATTGGTGGGTTCCCTCGGAGCGGCACCACACTGATGCGGGCCATGCTGGATGCCCACAATGCAGTGCGTTGCGGGGAGGAGACACGGGTGATCCCGCGTCTTCTTGCGATGCGTGCCACCTGGAGTCGCTCGGCCAGAGAGCGGGTCAGACTGGATGAGGCCGGGGTCACTGACCAGGTGTTGGACTCAGCAGTGCGGGCGTTCTTACTGGAGGTAATAATAGGTCATGGTGAGCCAGCAGCCAGGCTCTGTAACAAGGATCCATTTGCTCTGAAGTCTCTGTCCTACCTGGCCCGTATTTTCCCCCAGGCCAAGTTTGTTCTCATGCTACGGGATGGAAGGGCTACCGTCCACTCCATGATCTCACGCAAGGTGACCATCTCTGGTTTTGACCTGACTAGTTACAGGGACTGTCTAACTAAGTGGAGCCGTGCGGTGGAGGGCATGTACTCCCAGTGCCAGGGGGCGCCTGAGGGCAGCTGTCTGCCTGTGCGCTACGAGCAGCTGGTACTGCACCCAGAGGTAGAGATGAGGAAGCTGCTGAGCTTCCTGGGGTTGCCATGGGACCCGGCCGTGCTACACCACGAAGACCTTATTGGCAAGGCCGGCGGTGTGTCGCTGTCCAAAGTGGAGCGGTCCACAGACCAGGTTGTGAACCCTGTAAACACAGACGCCCTGTCTAAGTGGGTGGGTCACATCCCCTCTGATGTGCTGCGTGAGATGCATGACATCGCCCCCATGCTCGCCCGCCTCGGCTACGACCCCCTGGCAAACCCCCCAGACTACGCCCGGCCAGACCCCATCATAGCCCCCAACAACTACACACTGCTTCAGAGAACAGAAACCCTACATCCCAGTTAGGTGGAAAAAGAGGAGGAGGTAAACACAAGGCACTTTGGACATTCTAGAACCCTCTCCAGTTCCACATTCCATGCTCCTTTCCCATTGGCTCTCAGCCCACCATCAACCCCACTAAAGAGGATTCTAAACTGCATCTGTGTTTTTGCATAGGCCACCGTGACTGTTAGCCTATGTTGTGTTATTTGAGGGTAATGAGGGCATCAAATATGGATCAGTTTATTGCTCCACAATTCTGTGGGACAGTGGATGCCACTGTGTGGGAACTCCGGTGCCTCTTCCCTTGACTCATTCTCAGGAAAGTCCCCTGTCTGAaactctgcctcctctccctccacctagCCCTCCATGTACCAATAGTGTTGCAGTGTAAAGTGATTTTGTCCAACAATTGATGAACCTGATACCATTTCAATGTTTCTTATTAACTTCCTGTCACTCATCCAAAATCTGTGAACATGCTTTTGGAAAGatctgtgagagtgtgtgtgtgtgtgtaagtaggcatacatttatatttttcaaGATGTCATGTTTATTTTCTTAATAAATTATTTTGTTGGAGCATTCATTCAGTATTAGTTTGTAGCTTGTTTTGTCGAAATAAATAAGGCAAATCACTGTATAGCAA

Function

symbol description
tpst1 Predicted to enable protein-tyrosine sulfotransferase activity. Predicted to be involved in peptidyl-tyrosine sulfation. Predicted to be integral component of Golgi membrane. Predicted to be active in Golgi apparatus. Is expressed in several structures, including alar plate midbrain region; immature eye; integument; nervous system; and periderm. Orthologous to human TPST1 (tyrosylprotein sulfotransferase 1).

NR:

description
protein-tyrosine sulfotransferase 1

GO: NA

KEGG:

id description
K01021 TPST; protein-tyrosine sulfotransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021563249.2 False 2235 mRNA 0.51 7 42528504 42545974
XM_036944387.1 False 2368 mRNA 0.51 8 42528507 42545974
XM_036944386.1 True 2305 mRNA 0.51 7 42528743 42545974

Neighbor

gene id symbol gene type direction distance location
LOC110490091 crcp coding upstream 14867 42509769 ~ 42513637 (+)
LOC110490089 zpld1 coding upstream 84465 42398093 ~ 42444039 (+)
trnaa-ugc-120 NA coding upstream 154380 42374053 ~ 42374124 (+)
trnaa-ugc-119 NA coding upstream 155302 42373131 ~ 42373202 (+)
trnaa-ugc-118 NA coding upstream 156222 42371805 ~ 42383605 (+)
ncbp3 ncbp3 coding downstream 59333 42605307 ~ 42624228 (+)
alg8 alg8 coding downstream 150741 42696715 ~ 42725617 (+)
guca1d LOC106602844 coding downstream 191654 42737628 ~ 42759052 (+)
trnaa-cgc-2 NA coding downstream 335785 42881759 ~ 42881830 (+)
LOC118938889 kif12 coding downstream 588233 43134207 ~ 43156862 (+)
G1294052 NA non-coding upstream 78767 42449475 ~ 42449737 (+)
G1293979 NA non-coding upstream 205167 42321591 ~ 42323337 (+)
G1293974 NA non-coding upstream 223951 42304297 ~ 42304553 (+)
G1293798 NA non-coding upstream 271339 42256868 ~ 42257165 (+)
G1294276 NA non-coding downstream 11416 42557390 ~ 42568776 (+)
G1294336 NA non-coding downstream 99040 42645014 ~ 42645230 (+)
G1294325 NA non-coding downstream 137650 42683624 ~ 42684414 (+)
G1294362 NA non-coding downstream 188317 42734291 ~ 42734604 (+)
G1294322 NA non-coding downstream 223521 42769495 ~ 42770500 (+)
G1293295 NA other upstream 618893 41909034 ~ 41909611 (+)
G1293072 NA other upstream 940360 41583216 ~ 41589030 (+)
LOC110490048 il-1racp other upstream 2397770 40089464 ~ 40132600 (+)
G1291464 NA other upstream 2460597 40067558 ~ 40067907 (+)
G1290614 NA other upstream 3401495 39126272 ~ 39127009 (+)
G1294319 NA other downstream 218879 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 1050950 43596924 ~ 43597464 (+)
G1295730 NA other downstream 1370204 43916178 ~ 43916479 (+)
G1295845 NA other downstream 1483462 44029436 ~ 44029861 (+)
cblb cblb other downstream 1775529 44173352 ~ 44326246 (+)

Expression


Co-expression Network