alg8 (alg8)


Basic Information

Item Value
gene id alg8
gene name alg8
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 42696715 ~ 42725617 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021563254.2
GACACGGAGACTTTGAAACTCACGGAGCAACAAATTCTCTTTTAGTTACAACACTCTTACGATCTGAGTTGTATTACACATGTGTTATCTATATGTTGAAGTACACAGTGTGATATCTATCCCACCTCGACTCATACACAGAGGACAAGCAAGCGTTTATGACACCGGATGtgTCATGGCGACGCCCAGAGCAGACGACTGGAGTTGGTTTCCTGCATTAGCACTCGGCGTTTCTTTCCTGAAATGTATTTTGATAAACGCATATCATTCCACAGACTTTGAGGTTCACAGGAACTGGCTCGCCATCACTCACAGCCTTCCTGTGTCAAAATGGTACCATGAGAACACCTCAGAGTGGACCCTGGACTACCCTCCTTTGTTCGCCTGGTTTGAGTATAGCCTGTCCCACGTGGCTCAGCATTTTGACAAGGAGATGCTGGTGGTGCAGAATCTCCTCTACACCAGTCCTGCTACCATCCTTTTCCAGAGGCTCTCTGTCATCGTGACGGACATAGTCTTCATTTACGCTGTCAAAGAATGCTGTAGAAGTGTGAGGGAAGAGAAGGGTTCCAAGGACCTCCTGGGGCATCCATTTTTCATCCTGGCAGCTCTGCTTTTGTGGAACTTTGGCCTCCTCATCGTTGACCACATTCATTTCCAGTACAATGGTTTCCTGTTTGGAATACTACTGCTATCAGTGGCAAGACATTTACAGGGCAGACACCTGGAGGGGGCGTTGCTCTTCACTGTTCTCCTAAACCTGAAACACATCTACCTGTACATTGCTCCTGCCTACGGGATCTTCCTGCTGCGGAGCTACTGCTTCACTGAGGACAACACAGATGGCTCTGTGAGATGGAGCAGTTTCAGTCCTGTTCGTCTGGTAGCTCTGGGATCTATTGTGATCTCTGTCGGCGCCCTGTCCTTTGGTCCGTTCATTGCTATGggccaGCTCCCCCAGGTCCTTTCCAGACTCTTCCCCTTTAAGAGGGGCCTGTGCCACGCCTACTGGGCCCCTAACGTCTGGGCCCTCTACAACATGGTGGATAAAGCTCTGTCTGTGCTGGGTGTGCGTCTGAAGCTGTTGGATGTGGCAAAGCTTCCCAAAGCCTCAATGACTGGTGGATTGGTGCAGGAGTTCCAgcactccatcctcccctccgtctctccctccatcacactcATCTGCACTCTGCTCTCCATAATGcCTGCAGTGTTGAGTATCTGGTGTCGTCCGCGTGGTGCCCGGGGGTTCCTGCGCTGCCTGGTGGTCTGTGCCCTGGGCTCCTTCATGTTCGGCTGGCATGTCCACGAGAAGGCCATCCTCATGGCCATACTGCCCTTCAGCATACTAGCAGTTGAGAGCAGAGAGGATGCTGGGATCTTCCTGATGCTGACCACCACGGGGCATTACTCTCTGTTTCCACTTCTCTTCACTGCAGCCGAGCTGCCCATCAAAGTCCTGCTGATGCTGCTGTTCACGCTCTACAGCTTCACCTCCTTAAAGAAACTGTTCAGGGGTTCCCTCCTTAACCCTCTGGAAACCACCTACCTCCTGGGCCTGGTTGCCGTAGAGATCCTCTGTGAGGTTGTTTACCCTCTGTCGCCGTGGCAGCATACCATGCCCTTCGTGCCCCTGCTGGTGACATCAGTGTACTGCTCTCTGGGAGTCTGTTACTCCTTCATACGCCTCTACGTCTCTCTATTGAGGCAGCACGGGacagacaaacacaaacaactatgagacagagagagacactagtGAGTAGTGACCAATTCACAACCAACCCCTTTGTTGTATCCCAAATAGtatactattccctgtgtagtgcattacttttgaccagggccatatagAATGTCATTTGTGATGCACTCTTTGGCTTACATTGGTGTGTAAAGAAATAAGGTGGTGTTTCAAACTTTCTGCGATGCTGTTACTAGTCCATCCAGAGCAGATCTTCAAGTGTGCATCTATAAGTGTAGATTTGGGATGGGAAACACCAAGGAACAGTCACTTATAAATGCACACTCGAAGATCGGCTCTTGAAGGATGTATCATAGCATGAATAATatgtctgtctgaatgtgtgaAAAAAAGAAAACTTGTACCAAATGTATCTTAAATGACAATGGAAAAGTGGGGAAATAGTATGGAGTGGGATGAAGTTCATGCTGTATTTCTTATGTTTACAAATAAAAAGATAATAAACAGA
>XM_036944391.1
GACACGGAGACTTTGAAACTCACGGAGCAACAAATTCTCTTTTAGTTACAACACTCTTACGATCTGAGTTGTATTACACATGTGTTATCTATATGTTGAAGTACACAGTGTGATATCTATCCCACCTCGACTCATACACAGAGGACAAGCAAGCGTTTATGACACCGGATGtgTCATGGCGACGCCCAGAGCAGACGACTGGAGTTGGTTTCCTGCATTAGCACTCGGCGTTTCTTTCCTGAAATGTATTTTGATAAACGCATATCATTCCACAGACTTTGAGGTTCACAGGAACTGGCTCGCCATCACTCACAGCCTTCCTGTGTCAAAATGGTACCATGAGAACACCTCAGAGTGGACCCTGGACTACCCTCCTTTGTTCGCCTGGTTTGAGTATAGCCTGTCCCACGTGGCTCAGCATTTTGACAAGGAGATGCTGGTGGTGCAGAATCTCCTCTACACCAGTCCTGCTACCATCCTTTTCCAGAGGCTCTCTGTCATCGTGACGGACATAGTCTTCATTTACGCTGTCAAAGAATGCTGTAGAAGTGTGAGGGAAGAGAAGGGTTCCAAGGACCTCCTGGGGCATCCATTTTTCATCCTGGCAGCTCTGCTTTTGTGGAACTTTGGCCTCCTCATCGTTGACCACATTCATTTCCAGTACAATGGTTTCCTGTTTGGAATACTACTGCTATCAGTGGCAAGACATTTACAGggccaGCTCCCCCAGGTCCTTTCCAGACTCTTCCCCTTTAAGAGGGGCCTGTGCCACGCCTACTGGGCCCCTAACGTCTGGGCCCTCTACAACATGGTGGATAAAGCTCTGTCTGTGCTGGGTGTGCGTCTGAAGCTGTTGGATGTGGCAAAGCTTCCCAAAGCCTCAATGACTGGTGGATTGGTGCAGGAGTTCCAgcactccatcctcccctccgtctctccctccatcacactcATCTGCACTCTGCTCTCCATAATGcCTGCAGTGTTGAGTATCTGGTGTCGTCCGCGTGGTGCCCGGGGGTTCCTGCGCTGCCTGGTGGTCTGTGCCCTGGGCTCCTTCATGTTCGGCTGGCATGTCCACGAGAAGGCCATCCTCATGGCCATACTGCCCTTCAGCATACTAGCAGTTGAGAGCAGAGAGGATGCTGGGATCTTCCTGATGCTGACCACCACGGGGCATTACTCTCTGTTTCCACTTCTCTTCACTGCAGCCGAGCTGCCCATCAAAGTCCTGCTGATGCTGCTGTTCACGCTCTACAGCTTCACCTCCTTAAAGAAACTGTTCAGGGGTTCCCTCCTTAACCCTCTGGAAACCACCTACCTCCTGGGCCTGGTTGCCGTAGAGATCCTCTGTGAGGTTGTTTACCCTCTGTCGCCGTGGCAGCATACCATGCCCTTCGTGCCCCTGCTGGTGACATCAGTGTACTGCTCTCTGGGAGTCTGTTACTCCTTCATACGCCTCTACGTCTCTCTATTGAGGCAGCACGGGacagacaaacacaaacaactatgagacagagagagacactagtGAGTAGTGACCAATTCACAACCAACCCCTTTGTTGTATCCCAAATAGtatactattccctgtgtagtgcattacttttgaccagggccatatagAATGTCATTTGTGATGCACTCTTTGGCTTACATTGGTGTGTAAAGAAATAAGGTGGTGTTTCAAACTTTCTGCGATGCTGTTACTAGTCCATCCAGAGCAGATCTTCAAGTGTGCATCTATAAGTGTAGATTTGGGATGGGAAACACCAAGGAACAGTCACTTATAAATGCACACTCGAAGATCGGCTCTTGAAGGATGTATCATAGCATGAATAATatgtctgtctgaatgtgtgaAAAAAAGAAAACTTGTACCAAATGTATCTTAAATGACAATGGAAAAGTGGGGAAATAGTATGGAGTGGGATGAAGTTCATGCTGTATTTCTTATGTTTACAAATAAAAAGATAATAAACAGA

Function

symbol description
alg8 Predicted to enable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase activity. Predicted to be involved in oligosaccharide-lipid intermediate biosynthetic process and protein N-linked glycosylation. Predicted to be located in endoplasmic reticulum. Predicted to be active in endoplasmic reticulum membrane. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation Ih and polycystic liver disease. Orthologous to human ALG8 (ALG8 alpha-1,3-glucosyltransferase).

NR:

description
hypothetical protein cypCar_00026810

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0005789 endoplasmic reticulum membrane cellular_component
GO:0016758 transferase activity, transferring hexosyl groups molecular_function

KEGG:

id description
K03849 ALG8; alpha-1,3-glucosyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021563254.2 False 2216 mRNA 0.49 14 42696715 42725617
XM_036944391.1 True 1985 mRNA 0.48 12 42696715 42725617

Neighbor

gene id symbol gene type direction distance location
ncbp3 ncbp3 coding upstream 72487 42605307 ~ 42624228 (+)
tpst1l tpst1 coding upstream 150741 42528504 ~ 42545974 (+)
LOC110490091 crcp coding upstream 183078 42509769 ~ 42513637 (+)
LOC110490089 zpld1 coding upstream 252676 42398093 ~ 42444039 (+)
trnaa-ugc-120 NA coding upstream 322591 42374053 ~ 42374124 (+)
guca1d LOC106602844 coding downstream 12011 42737628 ~ 42759052 (+)
trnaa-cgc-2 NA coding downstream 156142 42881759 ~ 42881830 (+)
LOC118938889 kif12 coding downstream 408590 43134207 ~ 43156862 (+)
slc13a2 LOC106602849 coding downstream 504938 43230555 ~ 43300368 (+)
trnas-gcu-9 NA coding downstream 608772 43334389 ~ 43334470 (+)
G1294325 NA non-coding upstream 12301 42683624 ~ 42684414 (+)
G1294336 NA non-coding upstream 51485 42645014 ~ 42645230 (+)
G1294276 NA non-coding upstream 127939 42557390 ~ 42568776 (+)
G1294052 NA non-coding upstream 246978 42449475 ~ 42449737 (+)
trnaa-ugc-118 NA non-coding upstream 313110 42371805 ~ 42383605 (+)
G1294362 NA non-coding downstream 8674 42734291 ~ 42734604 (+)
G1294322 NA non-coding downstream 43878 42769495 ~ 42770500 (+)
G1294476 NA non-coding downstream 221918 42947535 ~ 42950110 (+)
G1294564 NA non-coding downstream 361850 43087467 ~ 43087808 (+)
G1294576 NA non-coding downstream 372591 43098208 ~ 43098439 (+)
G1293295 NA other upstream 787104 41909034 ~ 41909611 (+)
G1293072 NA other upstream 1108571 41583216 ~ 41589030 (+)
LOC110490048 il-1racp other upstream 2565981 40089464 ~ 40132600 (+)
G1291464 NA other upstream 2628808 40067558 ~ 40067907 (+)
G1290614 NA other upstream 3569706 39126272 ~ 39127009 (+)
G1294319 NA other downstream 39236 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 871307 43596924 ~ 43597464 (+)
G1295730 NA other downstream 1190561 43916178 ~ 43916479 (+)
G1295845 NA other downstream 1303819 44029436 ~ 44029861 (+)
cblb cblb other downstream 1595886 44173352 ~ 44326246 (+)

Expression


Co-expression Network