guca1d (LOC106602844)


Basic Information

Item Value
gene id guca1d
gene name LOC106602844
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 42737628 ~ 42759052 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021563256.2
ATGGGGAACCACGGCTCTAACCTGGATGATATCCTGGCAGAGGATATGCACCACTGGTACAACAAGTTTATGAAGGAGTCTCCGTCAGGACTCATCACGCTGTTCGAACTCAAGGGCATGCTGGGTCTGCGGGGGATGAACGAGAACGCTACCAGCTACGTGGACCAAGTCTTCTTCACCTTCGACATGGACGGGGACGGGTACATAGATTTTGTAGAGTACATCGCAGCCATCAGCCTGATGCTGAAGGGAGAAATCAACCAGAAACTCAAGTGGTACTTCAAATTGTTTGACCAGGACGGCAACGGGAAAATCGACAAGGATGAGTTGGAGACAATATTCACGgcaatCCAGGACATCACGCGGAACCAGGATGTCACCCCAGAGGAGATTGTGTCGCTCATATTCGAGAAGATCGACATCAACGGAGAGGgtGAGCTGACCCTAGAGGAGTTCATTGAGGGGGCGAAGGGTCACGACGACATCATGGAGATGCTGAAGAAGATGATGGACCTCACGCCCGTACTCATCATCATCGTCCAAGGAATAGTAGTCTGAGAGAGGCCTGGCCAACCACTGCCGTAGCCACTATGTACACCTGCGCCCGGGGAGAGAGATGACAGAAAGACTTAAGTCCATTACAAACATTTACCCCACAAACTAATAATTGTGACATTTTCCCGCACAATGAACCTGAGGGAATGCGTTACCTTATGAAACAAGACTGTTGTTCCCAATGAGGCTTCTATGTCACACTGCCAGGtctgggggtggagacaatataGTCCGTACATAGTGGATCCTAGGAAGAGAAGCAGCTAACAGGGTTCCGAATAACTAATTAATAAATAGTCCCAGACTGCTGAAGACTGAGGCATCCAGTCCTATACTGCAGCCCACTAACCACCCACAGATGACGggatggatgaagggaggaagacaTTGAGAGACCCTTTTTCAACACCATCACAACAAACAAACTGAATGAAAGAGAACATTTAAAGGGACAGCTATGGAGAGCGGTACAGATACCATCTTCACATTCTACCTGTTTGTGTTTGCTCTCTGACCACTCAGCAAGATGAAGACTTggattctgagagagagagagaattctctATCATAAATCATCActatagggccaggagttttcctGACCATTTGACCGCGACAAGGAGATGCTTTGGGCTTTAATTATAGGCTATGTTCAGgagtcaggtcacatggtcaggtaAAGGTCTTGTGTCGAATCATCTCCTCTGTAGGTATGACCGTAAATAGGCACAGATAGAGACCCTAGGGGTTCTGAAGTGCCTGCCCTTTTCCCCTCCTTTCGATTGGTGGAATTACTTTGTTCTTTTTTCCCCAGCCCTATCCCCCTCTTGAGACACCAGGAGAGCGGAGAGCGTCATGTTGCCATTTTTAAAGTCACGCACCCTCCCCCCGTCCTTGACCTTTCCTTaataagtctatataacacagAATCGTATGAATTCTTCGGGGAATGAATACTACAGGTCAGAaactttccacagggatgttgttCATGCTGACGCGATGGCATCATGCAGTTGCTGTAGCTTGGACAGTGGTACACCACCACCTGCCTGTACCGTTGACATcaggcaggatgggtccatggactcatgctgcttacgccaagtCTTGGACTCCGGATTGGTCGGACCAGGCAGTGTTTTTCAACTCCTCGATTGTCCGGTGTTGGTGattgcgtgcccactggagccacttcttcttGCTGGTAGGaatggaacccggtgtggtcgtctgctgcaatagcccatttgtgaggaccgacgagttgtgcaTTAGCCTACAATGTGTGATGTGTTTTTGCTGAAAATGAAGGCCTATGCAAAACAATTAATAATGGTGAATTTGGCAAAAGGAGAAGTAGAACACTTTGAATTTAAAACCTGCTCCATCAAAGGTCTGTGCACGACCCTGATCACAAATCATGAATCTCTATTATCAATCTAGTCCCGTCTTTCAGGTCTTCGGTCTGTTATGTTTGCTCGGTGCACACAAGTCTCTATCATATCTATCTCTATCACTATCTACTAATCATAGTAGTCATCATTGGGATAGCTAGCAACATGACGGAAGTAAAAAATCAGAAGTAGGCTTTCAAGATCATATCATGATTTTCCAAACATTTTGGAGGCAAAGTAGACTACTACAGTGTATGATTTACATATGATGTGAAAGGTGTGACTACAGTGTGACTCTGTAGTTCATTACTTCCTGTATGTTTCTCAGTTATCTGTAATACCGTTTCCAGAGCCACTGTGGAAGGAACCAATAATTCCTTTcacaacaatttcacaacaatttcATTATGGGAATTCTAATGAATGCTGTAAGTATTGTTTAATTTGTCttacatatatttttatattctgAGAATGAGTGGGTATGTGCTGTATACTGACAAGAAGGCTAGAATGAAAGGCTtatgtttttatatattattatatgaaATCATATATTCATATATTATTATATGAAATCAGATTTTGATTTGTCAACTGACATCTGCAAAAGTACAACGGGTGAACAAaatgaatattcctttgagcatggtgatgttattaattacactttggatggcgtatcaatacacccagtcactacagagatacaggcgtcctttctaactcagttgacggagaggaaggaaaccactcagggatttcaccatgccaatggtgactttaaaacagcttGAGTTGAATGGCTTTGACAGGAGAAAatggaggatggatcaacaacattgtaattactcaacaacactgacctaaatgacagagtgaaaagaaggaagcttgtacagaatacaaatattgtttgca

Function

NR:

description
PREDICTED: guanylyl cyclase-activating protein 1-like

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021563256.2 True 2873 mRNA 0.44 4 42737628 42759052

Neighbor

gene id symbol gene type direction distance location
alg8 alg8 coding upstream 12011 42696715 ~ 42725617 (+)
ncbp3 ncbp3 coding upstream 113400 42605307 ~ 42624228 (+)
tpst1l tpst1 coding upstream 191654 42528504 ~ 42545974 (+)
LOC110490091 crcp coding upstream 223991 42509769 ~ 42513637 (+)
LOC110490089 zpld1 coding upstream 293589 42398093 ~ 42444039 (+)
trnaa-cgc-2 NA coding downstream 122707 42881759 ~ 42881830 (+)
LOC118938889 kif12 coding downstream 375155 43134207 ~ 43156862 (+)
slc13a2 LOC106602849 coding downstream 471503 43230555 ~ 43300368 (+)
trnas-gcu-9 NA coding downstream 575337 43334389 ~ 43334470 (+)
trnas-gcu-10 NA coding downstream 575889 43334941 ~ 43335022 (+)
G1294362 NA non-coding upstream 3024 42734291 ~ 42734604 (+)
G1294325 NA non-coding upstream 53214 42683624 ~ 42684414 (+)
G1294336 NA non-coding upstream 92398 42645014 ~ 42645230 (+)
G1294276 NA non-coding upstream 168852 42557390 ~ 42568776 (+)
G1294052 NA non-coding upstream 287891 42449475 ~ 42449737 (+)
G1294322 NA non-coding downstream 10443 42769495 ~ 42770500 (+)
G1294476 NA non-coding downstream 188483 42947535 ~ 42950110 (+)
G1294564 NA non-coding downstream 328415 43087467 ~ 43087808 (+)
G1294576 NA non-coding downstream 339156 43098208 ~ 43098439 (+)
G1294570 NA non-coding downstream 351289 43110341 ~ 43113311 (+)
G1293295 NA other upstream 828017 41909034 ~ 41909611 (+)
G1293072 NA other upstream 1149484 41583216 ~ 41589030 (+)
LOC110490048 il-1racp other upstream 2606894 40089464 ~ 40132600 (+)
G1291464 NA other upstream 2669721 40067558 ~ 40067907 (+)
G1290614 NA other upstream 3610619 39126272 ~ 39127009 (+)
G1294319 NA other downstream 5801 42764853 ~ 42767937 (+)
G1295348 LOC106602853 other downstream 837872 43596924 ~ 43597464 (+)
G1295730 NA other downstream 1157126 43916178 ~ 43916479 (+)
G1295845 NA other downstream 1270384 44029436 ~ 44029861 (+)
cblb cblb other downstream 1562451 44173352 ~ 44326246 (+)

Expression


Co-expression Network