Gene
RNA
| Item | Value |
|---|---|
| gene id | aldh3a2b |
| gene name | LOC106602847 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 43101503 ~ 43121831 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| fatty aldehyde dehydrogenase-like isoform X1 |
| id | name | namespace |
|---|---|---|
| GO:0006081 | cellular aldehyde metabolic process | biological_process |
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0004030 | aldehyde dehydrogenase [NAD(P)+] activity | molecular_function |
| id | description |
|---|---|
| K00128 | ALDH; aldehyde dehydrogenase (NAD+) |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021563267.2 | False | 2812 | mRNA | 0.46 | 11 | 43101503 | 43121780 |
| XM_021563268.2 | True | 2684 | mRNA | 0.47 | 11 | 43101503 | 43121831 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| st6gal1 | LOC106602846 | coding | downstream | 10163 | 42908611 ~ 43091340 (-) |
| trnav-uac-21 | NA | coding | downstream | 217369 | 42884062 ~ 42884134 (-) |
| trnas-uga-82 | NA | coding | downstream | 220198 | 42881224 ~ 42881305 (-) |
| LOC110490099 | LOC106602845 | coding | downstream | 251857 | 42777467 ~ 42849646 (-) |
| ccdc90b | ccdc90b | coding | downstream | 404414 | 42680297 ~ 42697089 (-) |
| vtnb | vtn1 | coding | upstream | 48030 | 43169861 ~ 43196708 (-) |
| LOC110490729 | LOC106602851 | coding | upstream | 441557 | 43563388 ~ 43571516 (-) |
| LOC110490106 | LOC106602853 | coding | upstream | 471985 | 43593816 ~ 43598860 (-) |
| LOC110490731 | LOC106602834 | coding | upstream | 601526 | 43723357 ~ 43737731 (-) |
| LOC110490109 | LOC106602833 | coding | upstream | 637931 | 43759762 ~ 43788637 (-) |
| G1294934 | NA | non-coding | downstream | 3117 | 43098041 ~ 43098386 (-) |
| G1294929 | NA | non-coding | downstream | 11792 | 43089479 ~ 43089711 (-) |
| G1294773 | NA | non-coding | downstream | 230703 | 42870433 ~ 42870800 (-) |
| G1294670 | NA | non-coding | downstream | 329326 | 42771391 ~ 42772177 (-) |
| G1295077 | NA | non-coding | upstream | 76773 | 43198604 ~ 43198931 (-) |
| G1295100 | NA | non-coding | upstream | 103687 | 43225518 ~ 43232520 (-) |
| G1295154 | NA | non-coding | upstream | 184266 | 43306097 ~ 43309095 (-) |
| G1295177 | NA | non-coding | upstream | 206563 | 43328394 ~ 43328998 (-) |
| G1295179 | NA | non-coding | upstream | 209302 | 43331133 ~ 43331377 (-) |
| G1293933 | NA | other | downstream | 845386 | 42255714 ~ 42256117 (-) |
| LOC110490080 | LOC106612432 | other | downstream | 1291319 | 41805655 ~ 41810251 (-) |
| LOC110490074 | LOC106580655 | other | downstream | 1475121 | 41625005 ~ 41648672 (-) |
| G1293364 | NA | other | downstream | 1510489 | 41590707 ~ 41591014 (-) |
| G1292622 | LOC108238713 | other | downstream | 2101480 | 40999493 ~ 41000023 (-) |
| G1295948 | LOC106602830 | other | upstream | 883630 | 44005461 ~ 44024575 (-) |
| G1296025 | NA | other | upstream | 1017442 | 44139273 ~ 44140428 (-) |
| G1297069 | NA | other | upstream | 1739573 | 44861404 ~ 44876770 (-) |
| G1297112 | NA | other | upstream | 1827549 | 44949380 ~ 44954909 (-) |
| cdpf1 | cdpf1 | other | upstream | 2350850 | 45472681 ~ 45481816 (-) |
