trnas-gcu-80



Basic Information


Item Value
gene id trnas-gcu-80
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 43429462 ~ 43429543 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>trnas-gcu-80
GAtggggtggccgagtggttaaggcgatggactgctaatccattgtgctctgcatgcatgggttcgaatcccatccccatcg

Function


NR:

description
dipeptidyl peptidase 3 isoform X1

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnas-gcu-80 True 82 mRNA 0.56 1 43429462 43429543

Neighbor


gene id symbol gene type direction distance location
trnas-gcu-79 NA coding upstream 481 43428900 ~ 43428981 (+)
trnas-gcu-78 NA coding upstream 1043 43428338 ~ 43428419 (+)
trnas-gcu-77 NA coding upstream 1605 43427776 ~ 43427857 (+)
trnas-gcu-76 NA coding upstream 2167 43427214 ~ 43427295 (+)
trnas-gcu-75 NA coding upstream 2729 43426652 ~ 43426733 (+)
trnas-gcu-81 NA coding downstream 1601 43431144 ~ 43431225 (+)
trnas-gcu-82 NA coding downstream 2163 43431706 ~ 43431787 (+)
trnas-gcu-83 NA coding downstream 3836 43433379 ~ 43433460 (+)
trnas-gcu-84 NA coding downstream 4955 43434498 ~ 43434579 (+)
trnas-gcu-85 NA coding downstream 5517 43435060 ~ 43435141 (+)
G1295185 NA non-coding upstream 75832 43347076 ~ 43353630 (+)
G1295178 NA non-coding upstream 98085 43331079 ~ 43331377 (+)
G1295176 NA non-coding upstream 100515 43328626 ~ 43328947 (+)
G1295025 NA non-coding upstream 110079 43279935 ~ 43319383 (+)
G1295023 NA non-coding upstream 151823 43275609 ~ 43277639 (+)
trnas-gcu-157 NA non-coding downstream 79558 43509101 ~ 43510533 (+)
G1295289 NA non-coding downstream 94275 43523818 ~ 43524059 (+)
G1295306 NA non-coding downstream 111730 43541273 ~ 43541595 (+)
G1295316 NA non-coding downstream 119249 43548792 ~ 43549416 (+)
G1295346 NA non-coding downstream 154741 43584284 ~ 43584574 (+)
G1294319 NA other upstream 661525 42764853 ~ 42767937 (+)
G1293295 NA other upstream 1519851 41909034 ~ 41909611 (+)
G1293072 NA other upstream 1841318 41583216 ~ 41589030 (+)
LOC110490048 il-1racp other upstream 3298728 40089464 ~ 40132600 (+)
G1291464 NA other upstream 3361555 40067558 ~ 40067907 (+)
G1295348 LOC106602853 other downstream 167381 43596924 ~ 43597464 (+)
G1295730 NA other downstream 486635 43916178 ~ 43916479 (+)
G1295845 NA other downstream 599893 44029436 ~ 44029861 (+)
cblb cblb other downstream 891960 44173352 ~ 44326246 (+)
G1296266 LOC106602826 other downstream 1117636 44547179 ~ 44581048 (+)

Expression



Co-expression Network