mntb (LOC106602836)


Basic Information

Item Value
gene id mntb
gene name LOC106602836
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 43698455 ~ 43718346 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021563282.2
AGGGCGGGCCCTGACTGCATTCGCCTTGTAATGTATTCCCGTGATCGCATCGCCATCTTGTTGCAATCCCTCTTTTACGTGTGAGAAAGCATTTATCCAAGGAATATATTTTTACTCATTTTCTTTCcggtgagaggaagaaaggaatAAACAAAGTGCGCGTTCGTGTCTGCTGCGTTCCAGACAGTGCTCCCCGGCGGATCTCGGCTGTGCCTTTTTTCTTCTGTCCTGGGCGATCGGGTAGCCTACGGTGAGGGGCGCACGATGAGCATCGATACTCTTCTGGAAGCGGCCAGATATCTGGAATGGCAAGCCCAGCAACAACAGATCACACATGAGGAGGAGCGTTGCAGAGAGAAGGCGGAGCTTCACAGCCGGGAGGCAGAGTCCAGACGAGCAGAGGTTGTGACCTGTGCGGACCAGCCAATCAGATTCAACCATGTCACCTGGGGGCCATCACAGCATTGGCCTGAGTCATCACAACATTGTCAGCACcagcacctctctccctccactcaccctcttcccctctccctccctcctccccccatctccaTCGCTGTCATCCCCATGGTACCCGTTGTCACAGCTACGCCCTCTGTACCGCCCCTTCCCGTCATCACGACGATCGCTGCTGCGGCAACCTCGCTCCACCTCGGAGGCACCCAGGTGATGAAGGGAGGCTCCTCCCCTACTCAGCAGCAGCCAATCCAGCGCCAGCTGGCAGCCCAGGTGAAGGCGGAGCCTAACTCGATGACACCACAGACGGGCGGAAGCCCTAGCCAATCCCAACCTCCAATTCAGATTCCGTACCCAACCTCCATCATCACCAAAGCCGCTTCCCAACATGCACTACTTCCACAGCAAGCCATTCCCATGCAGCCACGCCCAAACGGAACCATCATGGATGACCTGAGAGGGTTGGACGGGAAGAGACGACCTGGAGGAGCTGGAACCAGAGAGGTGCACAACAAACTGGAGAAGAACAGAAGAGCTCACTTGAAGGATTGTTTTGATACACTGAAGAAGAACGTTCCAAACGTTGATGAGAAGAAGACCTCCAACCTCAGTGTTCTACGCAGTGCCCTGCGATACATACAGCGAAAGGAGAAGGAGTATGAACACGAGATGGAGCGTCTGGCGAGAGACAAGATCTCCACGCAGCAGAGACTGGCTGAGCTGAAGAACGAGCTGAGTCAGTGTATGGACGTTATGGAGATAGACAAGGTTCTCAGACAGACCGTACAACCAGAGGACGACCAGGCTTCTACTTCTACTgcctcagaaGGAGAAGACAACTTTGACCAGGACATTGATGAagacctctcccctcctcctccacccttctccctccccatTATACAGGCCAAATCATtcctcactcctcacctctccatcacacacaaGACCCTTTCCTCTGGGGTTCTGACCAGCCCCTCCCTCTTGgccccccctcctcacccccaaGCCATCGCCCCCGCCCCCCCACCTCACCCCCATCCGACCGTCCAAGTGTCACCCAAAGTCATCACCCACCCTTCCGTCATCCAGGCTGTCAATCACGTCCTCCCGGCTAATCACAAACACCTTACGCACATCGCTCCCTCTCCCAGTCCTGCCTCCTCCATCTCGCAGCCAATCACAGCAGCCGCCGCCGCTGCCCACCAGACAATCACGGCCCAGCCCATCGGACACATCACCGTCCACCCTGTGGCCCACCTGGGGGGTCCCCTGCCCCCCCACATGTACCCTCAGGGATTGACGGTCTCCCAGCCCACGGTGTTGGGGCATATCACCCACACCTTCACCCACCACACCCTTCCCCACGTCCAGGCTAGCCATGCTACCGCTAACGTGCCCCAGGTCAATGGGGCGGCTGTGCCTGGCCAGTGTGGCTCGTCCCTGGGGAAGCCCACAACCATGCtggcccaccaccaccaccaccaccatcaccacccacaGCTGGTGGGACAAACCACCGTCCTCAACCCAGTCACCATGGTGACTGTACCACCCTTCCCTGTTAGCACACTCAAACTGGCCtgagagacaggacaggcaggggagagagtgagagggcacgagagacagagggagggagggagagggtgacggagggagggag
>XM_021563281.2
GGCGGGCCCTGACTGCATTCGCCTTGTAATGTATTCCCGTGATCGCATCGCCATCTTGTTGCAATCCCTCTTTTACGTGTGAGAAAGCATTTATCCAAGGAATATATTTTTACTCATTTTCTTTCcggtgagaggaagaaaggaatAAACAAAGTGCGCGTTCGTGTCTGCTGCGTTCCAGACAGTGCTCCCCGGCGGATCTCGGCTGTGCCTTTTTTCTTCTGTCCTGGGCGATCGGGTAGCCTACGGTGAGGGGCGCACGATGAGCATCGATACTCTTCTGGAAGCGGCCAGATATCTGGAATGGCAAGCCCAGCAACAACAGATCACACATGAGGAGGAGCGTTGCAGAGAGAAGGCGGAGCTTCACAGCCGGGAGGCAGAGTCCAGACGAGCAGAGGTTGTGACCTGTGCGGACCAGCCAATCAGATTCAACCATGTCACCTGGGGGCCATCACAGCATTGGCCTGAGTCATCACAACATTGTCAGCACcagcacctctctccctccactcaccctcttcccctctccctccctcctccccccatctccaTCGCTGTCATCCCCATGGTACCCGTTGTCACAGCTACGCCCTCTGTACCGCCCCTTCCCGTCATCACGACGATCGCTGCTGCGGCAACCTCGCTCCACCTCGGAGGCACCCAGGTGATGAAGGGAGGCTCCTCCCCTACTCAGCAGCAGCCAATCCAGCGCCAGCTGGCAGCCCAGGTGAAGGCGGAGCCTAACTCGATGACACCACAGACGGGCGGAAGCCCTAGCCAATCCCAACCTCCAATTCAGATTCCGTACCCAACCTCCATCATCACCAAAGCCGCTTCCCAACATGCACTACTTCCACAGCAAGCCATTCCCATGCAGCCACGCCCAAACGGAACCATCATGGATGACCTGAGAGGGTTGGACGGGAAGAGACGACCTGGAGGAGCTGGAACCAGAGAGGTGCACAACAAACTGGAGAAGAACAGAAGAGCTCACTTGAAGGATTGTTTTGATACACTGAAGAAGAACGTTCCAAACGTTGATGAGAAGAAGACCTCCAACCTCAGTGTTCTACGCAGTGCCCTGCGATACATACAGACTCTGAAGCGAAAGGAGAAGGAGTATGAACACGAGATGGAGCGTCTGGCGAGAGACAAGATCTCCACGCAGCAGAGACTGGCTGAGCTGAAGAACGAGCTGAGTCAGTGTATGGACGTTATGGAGATAGACAAGGTTCTCAGACAGACCGTACAACCAGAGGACGACCAGGCTTCTACTTCTACTgcctcagaaGGAGAAGACAACTTTGACCAGGACATTGATGAagacctctcccctcctcctccacccttctccctccccatTATACAGGCCAAATCATtcctcactcctcacctctccatcacacacaaGACCCTTTCCTCTGGGGTTCTGACCAGCCCCTCCCTCTTGgccccccctcctcacccccaaGCCATCGCCCCCGCCCCCCCACCTCACCCCCATCCGACCGTCCAAGTGTCACCCAAAGTCATCACCCACCCTTCCGTCATCCAGGCTGTCAATCACGTCCTCCCGGCTAATCACAAACACCTTACGCACATCGCTCCCTCTCCCAGTCCTGCCTCCTCCATCTCGCAGCCAATCACAGCAGCCGCCGCCGCTGCCCACCAGACAATCACGGCCCAGCCCATCGGACACATCACCGTCCACCCTGTGGCCCACCTGGGGGGTCCCCTGCCCCCCCACATGTACCCTCAGGGATTGACGGTCTCCCAGCCCACGGTGTTGGGGCATATCACCCACACCTTCACCCACCACACCCTTCCCCACGTCCAGGCTAGCCATGCTACCGCTAACGTGCCCCAGGTCAATGGGGCGGCTGTGCCTGGCCAGTGTGGCTCGTCCCTGGGGAAGCCCACAACCATGCtggcccaccaccaccaccaccaccatcaccacccacaGCTGGTGGGACAAACCACCGTCCTCAACCCAGTCACCATGGTGACTGTACCACCCTTCCCTGTTAGCACACTCAAACTGGCCtgagagacaggacaggcaggggagagagtgagagggcacgagagacagagggagggagggagagggtgacggagggaggga

Function

NR:

description
max-binding protein MNT-like isoform X1

GO: NA

KEGG:

id description
K09115 MNT, ROX; MAX-binding protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021563282.2 False 2125 mRNA 0.58 5 43698455 43718346
XM_021563281.2 True 2131 mRNA 0.58 5 43698457 43718345

Neighbor

gene id symbol gene type direction distance location
LOC110490730 NA coding upstream 637 43696212 ~ 43697965 (+)
LOC110490107 lis1b coding upstream 6441 43641381 ~ 43692014 (+)
LOC110490104 LOC106602850 coding upstream 164221 43530002 ~ 43534234 (+)
trnas-gcu-162 NA coding upstream 181435 43516939 ~ 43517020 (+)
trnas-gcu-161 NA coding upstream 183666 43514708 ~ 43514789 (+)
mrps17 mrps17 coding downstream 279667 43998013 ~ 43999931 (+)
nipsnap2 nips2 coding downstream 287067 44005413 ~ 44024583 (+)
cblb cblb coding downstream 455006 44173352 ~ 44326246 (+)
LOC110490121 LOC106602827 coding downstream 867939 44586285 ~ 44603799 (+)
LOC110490732 LOC106602993 coding downstream 928447 44646793 ~ 44648830 (+)
G1295359 NA non-coding upstream 5667 43692331 ~ 43692788 (+)
G1295371 NA non-coding upstream 66148 43632057 ~ 43632307 (+)
G1295365 LOC106584613 non-coding upstream 77263 43620915 ~ 43621192 (+)
G1295349 LOC106602853 non-coding upstream 100226 43597577 ~ 43598229 (+)
G1295396 LOC106602834 non-coding downstream 11749 43730095 ~ 43730785 (+)
G1295401 NA non-coding downstream 15296 43733642 ~ 43734363 (+)
G1295402 NA non-coding downstream 16265 43734611 ~ 43734957 (+)
G1295404 NA non-coding downstream 17921 43736267 ~ 43736786 (+)
G1295405 NA non-coding downstream 19105 43737451 ~ 43737759 (+)
G1295348 LOC106602853 other upstream 100991 43596924 ~ 43597464 (+)
G1294319 NA other upstream 930518 42764853 ~ 42767937 (+)
G1293295 NA other upstream 1788844 41909034 ~ 41909611 (+)
G1293072 NA other upstream 2110311 41583216 ~ 41589030 (+)
LOC110490048 il-1racp other upstream 3567721 40089464 ~ 40132600 (+)
G1295730 NA other downstream 197832 43916178 ~ 43916479 (+)
G1295845 NA other downstream 311090 44029436 ~ 44029861 (+)
G1296266 LOC106602826 other downstream 828833 44547179 ~ 44581048 (+)
G1296185 NA other downstream 931355 44649701 ~ 44652079 (+)

Expression


Co-expression Network