LOC110490732 (LOC106602993)


Basic Information

Item Value
gene id LOC110490732
gene name LOC106602993
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 44646793 ~ 44648830 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021564189.2
ATGTCCAATACAACACCCCCATTCCAGCTCCTGTCCAACAACGTTTCGTTGACCAATCAGAGGTTGGCAGTGCCCATAAGGACGTTCATGagctttctgtctgtgtctccatgtctcctcttcctctacatcAACACTATCATGCTGTACAGTCTGAAGAGCAAGCCCATGTTCAGAGAGACCTCACGCTACATCTTGTTTGGTAACCTCCTCTTCGCCGACACCATCCTACTGCTGACCAGCCAACTGCTGTACATATTAGCCGTCGCTGGGTTGTTTGTGATCCGATATATATGTGTTGTGATTGTGTTGGTGGCCATTTTCACCAGCGCTGTTTCCCCTCTCAACCTGTCTGTGATGTCGCTAGAGAGGTACGTGGCGATCTGTTTTCCTCTGAGGCATGCCTCCATTGTCACCCCCAGGACTACGGGCGTGGTCATTGCTGTGGTGTGGATCCTGTGTTCCCTAAACACTATCATTAAGCTTGTCATGCTGCTGGTTCTAGAGTCCATGCCCCTGGACCAGTTCATGCAGGAATTCTGCTCTACCAGCGAGCTTTTCCACCTGAAGATTCACAACCAGGTAGACAACGTGTTCATCAGCATCGTCTTCATGACCGTTGGTTTTATCATCATGTACTCCTACATCGCTATGATGATGGTAGCCAAGTCGGCCTCCGCAGACAAGGACATAAACAGCAAGGCTCGTAACACGGTTCTCTTGCACCTGATCCAGCTAGGCCTgagtctctcctccaccctggtTCCGACTATAGTGTCAGCCTTGAAATCCAGAGCAATGGACAAAGCCACACAGATTGAGTATATTGTGTTTATCATCCTGATTATCCTGCCCAGGTGTCTGAGTCCTCTGATCTACGGCCTGAGAGACAAGGCATTCAGACACATCCTCATGTACCATCTCACCTGTGGCCTCAGACGCACAGTGGAGCCCATTAAAATCTCCAGCTATTGATGTTTTTTCTTGTAACAGAAACATTTATTCCGTTTTTAATGAAAACAGTTTTTAAGAACTTGTAATAATGCTGGAAGAATGAACTAAACTAAAACACAGGTATGTGAATGTTTTAAAGGGACAATCTGCAGTTGGTACATACTTTTTTACCTTACAAATAAATGAAGGATAtgcacccattgattcttgaagaatattacTTATACTTCGGCTTCTGATGGGGTTCGAGGCATTTAGACGTTTGTTTGACTCCAATGTTCgtaaaacaaagtaaatgtaaacaaacactccaTAGCCTCAAAACACGGTTAACACTATAATTTTGATGTCATGGaatgtcagtccttgcatccatagcatCTTCTTTGAATTTGAGAgttagttacatttctccagcctcatccgtcagctttttaccgaaacagtgccgctttgttattgtttctttCAACtgcggattgcccctttaacttGAAACCACAGTATGTATGTTTTCCTGTAATACAATTCATTAA

Function

NR:

description
olfactory receptor-like protein OLF4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021564189.2 True 1490 mRNA 0.44 3 44646793 44648830

Neighbor

gene id symbol gene type direction distance location
LOC110490121 LOC106602827 coding upstream 42994 44586285 ~ 44603799 (+)
cblb cblb coding upstream 320547 44173352 ~ 44326246 (+)
nipsnap2 nips2 coding upstream 622210 44005413 ~ 44024583 (+)
mrps17 mrps17 coding upstream 646862 43998013 ~ 43999931 (+)
mntb LOC106602836 coding upstream 928447 43698455 ~ 43718346 (+)
cldn2 cldn7 coding downstream 70470 44719300 ~ 44721744 (+)
LOC110490127 LOC106602822 coding downstream 86930 44735760 ~ 44848514 (+)
LOC110490129 LOC106602819 coding downstream 289155 44937985 ~ 44993895 (+)
LOC110490132 LOC106602816 coding downstream 441315 45090145 ~ 45151980 (+)
LOC110490134 LOC106602815 coding downstream 509239 45158069 ~ 45174534 (+)
G1296307 NA non-coding upstream 16681 44629853 ~ 44630112 (+)
G1296304 NA non-coding upstream 21924 44624569 ~ 44624869 (+)
G1296303 NA non-coding upstream 22708 44623621 ~ 44624085 (+)
G1296182 NA non-coding upstream 32980 44397871 ~ 44613813 (+)
G1296283 NA non-coding upstream 71898 44569481 ~ 44574895 (+)
G1296186 NA non-coding downstream 3417 44652247 ~ 44654702 (+)
G1296189 prrg3 non-coding downstream 6085 44654915 ~ 44656628 (+)
G1296322 NA non-coding downstream 11647 44660477 ~ 44660710 (+)
G1296324 prrg3 non-coding downstream 14002 44662832 ~ 44663251 (+)
G1296331 NA non-coding downstream 21855 44670685 ~ 44671027 (+)
G1296266 LOC106602826 other upstream 65745 44547179 ~ 44581048 (+)
G1295845 NA other upstream 616932 44029436 ~ 44029861 (+)
G1295730 NA other upstream 730314 43916178 ~ 43916479 (+)
G1295348 LOC106602853 other upstream 1049329 43596924 ~ 43597464 (+)
G1296185 NA other downstream 871 44649701 ~ 44652079 (+)
G1298452 NA other downstream 1605509 46254339 ~ 46260437 (+)
brd1a LOC106575995 other downstream 1665422 46293582 ~ 46316075 (+)
G1299894 NA other downstream 2921000 47569830 ~ 47570663 (+)
G1300598 LOC106575986 other downstream 3297538 47946368 ~ 47947892 (+)

Expression


Co-expression Network