Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110490151 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 45715991 ~ 45717142 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ankyrin repeat and KH domain-containing protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002468667.2 | False | 512 | mRNA | 0.46 | 2 | 45715991 | 45717142 |
| TU1481007 | True | 411 | lncRNA | 0.47 | 2 | 45715997 | 45717047 |
45,714,800
45,715,200
45,715,600
45,716,000
45,716,400
45,716,800
45,717,200
45,717,600
45,718,000
45,718,400
45,718,800
45,719,200
45,719,600
45,720,000
45,720,400
45,720,800
NC_048579.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490145 | LOC106575954 | coding | downstream | 46851 | 45656855 ~ 45669140 (-) |
| atxn10 | atxn10 | coding | downstream | 105825 | 45597961 ~ 45610166 (-) |
| LOC110490142 | NA | coding | downstream | 163441 | 45518126 ~ 45552550 (-) |
| pparaa | NA | coding | downstream | 217996 | 45493665 ~ 45497995 (-) |
| cdpf1 | cdpf1 | coding | downstream | 234175 | 45472681 ~ 45481816 (-) |
| LOC110490153 | LOC106575999 | coding | upstream | 122979 | 45828313 ~ 45889389 (-) |
| creld2 | LOC106575997 | coding | upstream | 537195 | 46254337 ~ 46260490 (-) |
| zbed4 | LOC106575996 | coding | upstream | 551848 | 46268990 ~ 46275662 (-) |
| LOC110490845 | NA | coding | upstream | 1000848 | 46717990 ~ 46719108 (-) |
| tafa5a | fam19a5 | coding | upstream | 1105114 | 46822067 ~ 46995100 (-) |
| G1297967 | NA | non-coding | downstream | 80799 | 45629928 ~ 45635192 (-) |
| G1297672 | NA | non-coding | downstream | 123478 | 45591837 ~ 45592513 (-) |
| G1297658 | NA | non-coding | downstream | 148322 | 45567406 ~ 45567669 (-) |
| G1297656 | NA | non-coding | downstream | 151121 | 45564563 ~ 45564870 (-) |
| G1297652 | NA | non-coding | downstream | 159694 | 45556047 ~ 45556297 (-) |
| G1298096 | NA | non-coding | upstream | 108059 | 45825201 ~ 45831085 (-) |
| G1298138 | NA | non-coding | upstream | 177365 | 45894507 ~ 45911899 (-) |
| G1298245 | NA | non-coding | upstream | 338865 | 46056007 ~ 46083653 (-) |
| G1298274 | NA | non-coding | upstream | 385409 | 46102551 ~ 46102791 (-) |
| G1297577 | NA | other | downstream | 212879 | 45495755 ~ 45503112 (-) |
| G1297112 | NA | other | downstream | 761082 | 44949380 ~ 44954909 (-) |
| G1297069 | NA | other | downstream | 839221 | 44861404 ~ 44876770 (-) |
| G1296025 | NA | other | downstream | 1575563 | 44139273 ~ 44140428 (-) |
| G1298047 | kdm5a | other | upstream | 34919 | 45752061 ~ 45762385 (-) |
| G1298177 | NA | other | upstream | 238917 | 45956059 ~ 45989263 (-) |
| G1298541 | LOC106575995 | other | upstream | 579926 | 46295361 ~ 46297952 (-) |
| tbc1d22a | tbc1d22a | other | upstream | 1500394 | 47217532 ~ 47405004 (-) |
