LOC118938808


Basic Information

Item Value
gene id LOC118938808
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 48200218 ~ 48201214 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005036101.1
CAACTCAATTCTAAGAGGCAGCATATTGGACGACTCCACAGTAATTGATCATTCGTGACTTTAACTTattcctgttatctctagagcatcTCGTATATCTATAGCGCTGCGTTTCTACCCCATCTTACCATGGATAGGGTTTTgtgcattccggagttcacttatggtcccacaaaggtaatcttTGGAGATATTcattttagcatactgtaaaaGCCTGTGCACaatgtgcataacaaagcatcattattGTCATTCTCTTCAAAGGAATTCTGCAGAAGCAGCCTTTATTTCcagactctgcaggcctgctgggaggaaacatattacaataaacagaagaagctcatggtccactatctgctgctccagagtcaaggccAGGTCCCGCACCATGTCACCACGGAGCACATGAGCGACTGGCTGGTGTCTCAGGGCAAAAAATCCCTTAGGGAGAGggtgtggaaggaaaccctggaggaggggaatgacctcgctcggctggtaagaCAATGAGAGTTAGACACATACTACAAGTCAGTGAGCTCTTTACTAGCCTTTCAACAACTAGTTAGTACAGCAGAATAGATATGTTGTGAAATTTCACTAATCGGACTTCCTGTTTCCTACGGCAGACCTGGGAAGTcaacacttgcctaaaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC106568775

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005036101.1 True 662 mRNA 0.45 3 48200218 48201214
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118938807 LOC106590944 coding downstream 1284 48198443 ~ 48198934 (-)
LOC118938806 LOC106568775 coding downstream 6364 48192567 ~ 48193854 (-)
LOC118938804 NA coding downstream 19277 48179278 ~ 48180941 (-)
LOC118938803 NA coding downstream 53866 48142165 ~ 48148218 (-)
LOC110490175 LOC106575984 coding downstream 96910 48001878 ~ 48103308 (-)
LOC110490737 NA coding upstream 7007 48208221 ~ 48211551 (-)
LOC110490181 LOC106568775 coding upstream 19922 48221136 ~ 48221639 (-)
LOC118938921 NA coding upstream 26420 48227634 ~ 48229523 (-)
LOC118938890 NA coding upstream 38415 48239629 ~ 48240754 (-)
LOC110490179 LOC106568775 coding upstream 39577 48240791 ~ 48241911 (-)
G1300816 NA non-coding downstream 38328 48153966 ~ 48161890 (-)
G1300860 LOC106591259 non-coding downstream 78145 48121002 ~ 48122073 (-)
G1300858 NA non-coding downstream 80071 48118796 ~ 48120147 (-)
G1300850 NA non-coding downstream 91917 48108085 ~ 48108301 (-)
G1300889 NA non-coding upstream 12301 48213515 ~ 48232924 (-)
G1301032 NA non-coding upstream 78537 48279751 ~ 48281566 (-)
G1301035 NA non-coding upstream 83374 48284588 ~ 48284800 (-)
G1301060 NA non-coding upstream 133392 48334606 ~ 48335611 (-)
celsr1a LOC106576003 other downstream 496180 47584674 ~ 47707520 (-)
tbc1d22a tbc1d22a other downstream 980603 47217532 ~ 47405004 (-)
tafa5a fam19a5 other downstream 1246794 46822067 ~ 46995100 (-)
G1298541 LOC106575995 other downstream 1902266 46295361 ~ 46297952 (-)
G1298177 NA other downstream 2210955 45956059 ~ 45989263 (-)
si:dkeyp-27e10.3 LOC106576037 other upstream 634380 48822973 ~ 48839311 (-)
G1302602 NA other upstream 1462737 49663951 ~ 49664296 (-)
LOC110490244 LOC106609225 other upstream 2098250 50290050 ~ 50301082 (-)
LOC110490264 LOC106576080 other upstream 2998015 51199223 ~ 51205927 (-)
LOC110490744 LOC106576129 other upstream 3585417 51785488 ~ 51793354 (-)

Expression

LOC118938808 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.
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LOC118938808 Expression in each Bioproject

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LOC118938808 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 20.
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Co-expression Network