pyroxd1 (pyroxd1)


Basic Information

Item Value
gene id pyroxd1
gene name pyroxd1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 48300602 ~ 48308741 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021563417.2
CGCTTGCCATAGTTTGGACACAAACAAGGAAGTGCATTATATTGAAAATTTAGAGCAACAAAATAGTGAATGTAATGCATTTAAACCATGTATTGCTACTTTATTTGACATAAAACAATTTGGATGCATACAGTGCAGTTCATTATAAACGGGTACAATTAAATTGGCTATTATAGGTTAAGGACCTTGCGCGAGATCTCCAATTTCTGTCAATGCaggtatgctagctagctaacttgctagTTTAGCTGAACAGTTATGGCAGCAAATCCCGAAAAGACATTCAAGTTTGTGGTCGTCGGTGGTGGCATTGCAGGTGTAACGTGTGCTGAGCAGCTGGCCTCCCAGTTCCCATCAGCTGATGTTGCTCTCCTGACAGCAGCCCCTCTGATTAAGGCAGTCTGCAACTTCAAACAGGTATCTAAGACGCTGGAGGAGTTTGATGTGGAGGAGAGGCCCTCCAGTGTTCTAGAGGAAAAGTATGCCAACCTGAGAGTCATCCAGTCTGCAGTGAAGGCCCTTCATGCACAACAACATACTTTGCAGTCTGTGGATGGTCTGGAGATCCACTATGAGAAGCTGTGTATCTGTAGCGGGGGCAGACCCAAACTCCTTACCCAGGATAACCCCTATGTGCTGGGGATACGAGACACAGATAGTGCCCAGGAGTTTCAGAAGCGGTTATCCAAAGCCAAGCGAATTGTAGTCGTTGGAAATGGAGGGATTGCCTTGGAACTAGTGTATGAGGTGGAAGGTTGTGAGGTAATCTGGGTAGTGAAAGACAAGGCCATAGGAAACACCTTCTTTGACGCGGGAGCAGCCCAGTTCCTGATCCCCTCCCTGGACACAGACAAACCAGAGCGAGCTGCTACCTGTAAGAGGGCTCGCTACACCATAGAGGGGCCTGCAGCTACGCAGGGCCTTGCTGTAGGTGGCGACAGACAAGGCCAGAGAAGAGGGTTGGAAGAGCCAGGCAGTGCCCTGGGACCAGACTGGCATGAAGGCATCAGtctgagaggagcagaggagGTGCCTCACAGGGTGTCAGTGGAGTACCAGTCTGAGGTGAAACAGATCTACACTCACCAGGACTTCCTGCTGTCACCGCTTGCCTCACAGACAGCAGACACTGGCTCTTGGCCAGTGTATGCTCAGCTGACCAATGGGAAGACTTTTGGCTGTGACTTCATCATCAGTGCTACAGGAGTCGTGCCAAACACCGAACCTTTTCTCCATGGAAACAGCTTTGCGTTAGCTGAGGACTCTGGGCTGAAAGTGGATGACCACATGATGACAACAGAACCAGACATTTACGCTGCTGGAGACGTATGTACAGCAGGCTGGGAGCCAAGCCACCTCTGGCAGCAGATGCGTCTGTGGACGCAGGCCCGTCAGATGGGCTGGTACGCAGGCCGATGTATGGCTGCTGATGTCCTGTCTGAAACCATAGAGCTGGACTTCTGCTTTGAACTCTTCTCTCACATTACAAAGTTCTTCAACTacaagGTGGTTCTGCTGGGGAAGTTTAACGGCCAGGGTCTGGGTCTGAACCAGGAGTTGTTGGTGCGCTGCACTAAGGGCCATGAGTACGTCAAGGTAGTGCTGAGCGGAGGGAGGATGTTGGGAGCAGTCCTTATTGGAGAGACTGACCTGGAAGAGACCTTTGAGAACCTCATCCTCAACCAGATGGACCTAACACCCTACGGAGAAGAGCTACTAAACCCCAACATAGACATAGAGGACTACTTTGACTGAGCCTGTGTGTCTACCTAACACCCTATGGAGGGTTACTACTCAACCCCGACATAGACCACTTTGACTGAGGGGCCAAGAACTTCCTCGTAAATCAATACTAAACTGGATGTCTGCTTTAGCCCTGTTTATATCTGGTGCTAACACGTCCTGATCTTGCCCACATTTTTAGACTAGTGTAgatgatttaaaaataaaaaaaaactgattgtgatcagatcttcctgaccacctccGGAGGTAGTCAGGGACACATTGTATCTGGATTGTGTACACAGATCTGGATTATCAAACCATTTAATTTGTccctctaaaatcattgacaggtggcACTATTGACCCAATGTGTCAGTACTTgttttaacataaaacatttattattttgaaACAATATCTGTCAAATAATTTGCATACAGGGAGGGACCAGGTCATCTGGTAACAATGCAGACACTGTGGATAGATAGTCTTGTTCCCACGGCAGcccttaatgctcaaatcagtttgATTTTTCAAATCCATTTTGGAATACTGACTTTCCAAACAGTGACCTAATCggatgtgtgtgttcagacagcagtcatttgctaACATGGCTGCGCTAGCTGTCATAGTAACAACAGATGTGTGCgcagtggtgtaggctgattggtgcTTCCTATCCCTCGGAAGTTATCTACTGTAGCAAGCTAAAGTGATAGCAATGCCTGCCATGGACATTTCCCAGTtactttgaatgttcaaaatcgtAGTGTAAGAACAGAAGCTAGGTAGCCATTTAGCTTTCTAGCACAGTCactcatttgtttgtaaacaattaacaagctagttagctaccacatgttGTCAAACTGTCAGAGTAGCGAGGAAGCAACACGATATACCAAATGACAGTCTAAAAACCACTTGAGGGCAAATAAACcagatttgaccgttcagacaAGTAGCAtatggccaggaatcagatttatCTTATTTAAAATCACCTTTGAAGGTGGTTTGAAATATCagattccatgtgctttttggctgttcagactgcaAGAAAAATAGATTAAAATCTGATATGCATGTATTTTTTTGTCACTTTAAACTGCCAATGTGATTAAAATACCATGTGTAGTTGCTGCAAATGTGTAGACTAGTGATGCGGTGGTCAGCTGTTTTTTCAACAGCActtgctaataacccatctgcAACCACCCGACTACATGTGATAGTGAAAATATGAGGCCCACAGCTGACTAACCCCCGCAAAAAATGCGCCTTCCCTTTTTTCCTCAGTGGATCGATGTGAACTTTTTCTGCCCAAGTTACCAAAGCATTTGGCACGTGTACAGTTAGGCCCACACACTAAATCCAGATAAAAATGAAAGATAAATCTCAATGTAGCTATAGATATGAATTGCACAATAATGattaatttatggattttttttatgCATTGTTTTCCCTTTATTCAACCTGCACGCGTGTGTATGTGATCCTTGTGTAGCCGCTAATAGTGATCGGATCATCTCGATTTGACCACAAAAACCACATGTTAATGCAAGGTGTAACCAGGGCTATAAATATACCTTTGTTGAGAAAGGGCATTGGCAAGTTTAGAACCTGACATCCTGGTCCCTATCCCAGTGCCTAGTCTATTGCACAAGCAATTGGGAGGGTACAACTagttttttgttttacatataaAGCTGTTCAGTCAGGTAGAATTGTGATTAAGGTTGGAAAACAAAAGCTGCATTGGCATTCCAACTGGCAACATTGTGTCGCAAACCGTGTTTAACGCCCTCAAACCTACTTCCCTAAAGAaggcttttctttatttgactCTCACCTGTACACTCTTTGACCTGTCCATCGAGCTTTCATCCAACCAATCAATTCGTCCCTGAGTACCTCTGGAAACAGTCTGGAATTTCTGATCACAATCAGTTCTTTTAATCGTCTTAACCTGTCTAaaaatgtggacaagatcaggacacgtgttagcaccaggtataaacggggctcTTGACTGAATCCTGCAGGGCTAAGAACAGATTTGCGTATCAATATCAAACCTCGAGTTAACATTGTTTTCAAGAAAAGGGTTATGAGTAATCTGCAATACACTGTAAAGAAAAACTTCTGGGGTGAATTGAACCAACATACTTAATAAAATCAATGCAAGTCATTTTACCAAACAAGTTAAGAATAAATCCAACTCTGTTGCATAAA

Function

symbol description
pyroxd1 Predicted to enable oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor. Predicted to be located in nucleus and sarcomere. Is expressed in female organism and trunk musculature. Human ortholog(s) of this gene implicated in myofibrillar myopathy 8. Orthologous to human PYROXD1 (pyridine nucleotide-disulphide oxidoreductase domain 1).

NR:

description
pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1

GO: NA

KEGG:

id description
K24426 PYROXD1; pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021563417.2 True 3972 mRNA 0.44 11 48300602 48308741

Neighbor

gene id symbol gene type direction distance location
LOC110490846 LOC106576099 coding upstream 33427 48264481 ~ 48267175 (+)
LOC118938805 NA coding upstream 121458 48175444 ~ 48179144 (+)
slco1d1 LOC106575962 coding upstream 138718 48147072 ~ 48161884 (+)
LOC110490734 LOC106576001 coding upstream 154333 48118774 ~ 48146269 (+)
LOC110490177 NA coding upstream 298717 47999128 ~ 48001885 (+)
LOC110490186 LOC106576018 coding downstream 20056 48328797 ~ 48332219 (+)
LOC110490188 LOC106566434 coding downstream 27390 48336131 ~ 48337866 (+)
kiss2 kiss2 coding downstream 51058 48359799 ~ 48360553 (+)
LOC110490738 LOC106576023 coding downstream 125017 48433758 ~ 48441874 (+)
LOC110490194 calu coding downstream 161280 48470021 ~ 48479877 (+)
G1300931 NA non-coding upstream 27113 48273194 ~ 48273489 (+)
G1300923 NA non-coding upstream 30431 48269946 ~ 48270171 (+)
G1300752 NA non-coding upstream 44156 48227136 ~ 48256446 (+)
G1300730 NA non-coding upstream 50492 48249256 ~ 48250110 (+)
G1300754 NA non-coding upstream 58803 48229713 ~ 48241799 (+)
G1300957 LOC106566433 non-coding downstream 36078 48344819 ~ 48349516 (+)
G1300967 NA non-coding downstream 51974 48360715 ~ 48360941 (+)
G1300953 ldhb non-coding downstream 53996 48362737 ~ 48367701 (+)
G1300972 NA non-coding downstream 69818 48378559 ~ 48378910 (+)
G1300973 NA non-coding downstream 70780 48379521 ~ 48379762 (+)
G1300598 LOC106575986 other upstream 352710 47946368 ~ 47947892 (+)
G1299894 NA other upstream 729939 47569830 ~ 47570663 (+)
brd1a LOC106575995 other upstream 1984600 46293582 ~ 46316075 (+)
G1298452 NA other upstream 2040165 46254339 ~ 46260437 (+)
G1296185 NA other upstream 3648523 44649701 ~ 44652079 (+)
G1301200 NA other downstream 275966 48584707 ~ 48585263 (+)
G1301458 NA other downstream 621305 48930046 ~ 48930588 (+)
G1301706 NA other downstream 1086482 49395223 ~ 49396921 (+)
LOC110490228 NA other downstream 1089717 49398275 ~ 49410313 (+)

Expression


Co-expression Network