LOC110490205 (LOC106576033)


Basic Information

Item Value
gene id LOC110490205
gene name LOC106576033
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 48775456 ~ 48783034 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021563458.2
TCCAGACTAAACTACAACCCCCACAATGCATGCAGCAGGGTGCTGTCACATGGACGTGCGGTGAGCCGGGTTGTAGTTCATTGCTAATGCAAGTTTTTTGCGCTCACTCTTCATGATCCTGGACCCGAACATGGCTTCAGCTACAGACCCCTGCTCATTTTCCTCCTTCTCCAAGTGCGTTACCAAGCACCTGAATCTCACCTACCATGTGGATTTTGACAGCCATGTCATCAAAGCTAAGGTCGCGCTCACCGTGGAGGTTTTAGTGGATAATTTCACGTCTTTGACCCTTGACACGAAGGACCTGAAGGTCTCTAAGGTAACAGCCAATGGACAGGCAGCAAAGTTCACTCTGGGACCCAAGCACAGCTTCATGGGAACCCCTCTGGAGATCACACTGCCCTTTGACCTCTCCAGggGCCAGCATGTGATCGTGGAGGTGACTTATGAGACTGCACCTAGTGCTTCTGCGCTGCAGTGGCTCACTCCTGAACAGACTGCTGGGAAGAAACACCCCTACCTCTTCAGCCAgtgccagGCCACCCATTGCAGGAGCATGGTACCCTGCCAGGATACCCCCGCCATGAAACACACCTACTATGCCCAGGTGTCTGTCCCCAAGGAGCTGGTGGCTGTGATGAGCGCTGTACGGGATGGACAGGAGCCTGATCCCCAGGACAGCAGCCGGGCCATCTACCGCTTCAGACAACCAGTGCCCATGCCCTCTTACCTCATTGCCATCGTGGTGGGAGCTCTGGagagcagAGAGATTGGGCCCAGGTCTCGTGTTTGGTCAGAGAAGGAGTTTGTGGACAAGGCAGCTTTTGAGTTCTCAGAGACAGAGACCATGTTGAAGACAGCTGAGGACCTTGCGGGTCCGTATGTGTGGGGCCAGTATGACATTCTGGTCCTGCCCCCCTCCTTCCCGTATGGAGGCATGGAGAACCCCTGCCTTACCTTTGCCACCCCCACACTGCTGGCTGGAGACAGATCCTTGTCCAATGTCATAGCCCATGAGATCTCTCACAGCTGGACTGGCAACCTGGTGACCAACAAGACCTGGGAGCACTTCTGGTTGAACGAGGGTCACACGGTGTACCTTGAGAGAATGATTGGCAGGTCTATGGAGAGTGAACAGTTCAGACAGTTCAAGGCCATGGGCGGCTGGAAGGACCTGCAGGAATCgGTGAACACGTTTGGGGCCAACAACCCTCTGACCAACCTGGTTCCCAACATGAATGAGGTGGACCCTGACGATGCcttctcctctgtcccctacGAGAAGGGTTTCGCTCTTCTATACCACCTGGAGGAGCTCATGGGAGGACctgAGGTGTTTATGGGTTTTGTGAAGTCGTACATCCAGATGTTTGCTTACAGCAGCGTCACTACTGAGGAATGGAAGAAGTACCTCTTCACCTACTTTAAGAACAAGGTGGACATCCTGAATAAGGTGGACTGGAACGCCTGGATGCACACCCCTGGGATGCCCCCCGTCAAACCACAATATGACACCACCATGGCAGATGCCTGCATCGCGCTGTGTAAGAGATGGGTGAAGaccAAAGAGGGGGATCTGGGGAATTTCAGTGAAGTGGATATGAAGACTCTCTCCACCCACCAGCTTATAGAGTTCCTGTCTCTGCTCCTGCAAGAGGATCCCCTCCCCCTCAGCCATGTGAAGAGGATGCAGGAAGTGTACCGACTCAACGCCCTCAACAACGCAGAGATCCGCTTCAGGTGGCTGCGGCTGTGTGTCAAGTCCAAGTGGGAGGATGCCGTTCCCATGGCGCTGAAGATGGCGACAGAGCAGGGGAGGATGAAGTTCACACGGCCGCTATTCAAAGAGGTGTACAACTTTGATAAGTATCGCGAGGAGGCGGTGCGTGTGTTCATAGCCCACCGGGCAGCCATGCACCCAGTGACGTCTAATCTGGTGGCCAAGGACCTGAAGGTGGACACTGGCAAGAGCACCTGATTCTAATTGGAATCCCCACCGGAAGCACTCCGAGACCGGCATTTTTACCGGGACACACCCCCCACCCCATTGCCCAAAACGACCGGAGAAAGCTCGAGAGAAGCTTTCAGTCACACCCCCACTTTTAATAACTGTCTACTTTGCTCGGCCGCTATTCAGAATTGTcttttttctgtttgttttacATTAAGGTTTATGATACGTCGAGCAGAGTTGTGGTCAATATTGAATTTAATGCAATTCAAACTAATTTGCCACAGCCCACAGGAAGCAGAATTTGAATTGAAGGAAGTAGAATTGAATTCAAACCAATTATACTAAGACATGGAAGTCTCTTAATTTGACAAATCTTTTTTAAAAAGCATATGCCACATAATACACATAACATTTCAAATACTatggctctattcaatcagatccgctttagcaGACTTCTCCATAGCGGTTGTTTTGACAACGGAGGTGGAACTGTCAAATCAACAAGTGACTCccagcattatacctaaagcggacattgccattggctgttGCATTAACAGAAATCCCGTCAAGCCTTTTTTACGAGTTTGAACACTgatatgtaatctacacctcgattaggATGATAGAAATCGTCATTATTTTGTTAAATGATTTTTCAagtatttctatatagcctacaatTTCTTGTTCTGAATTTCTAATGCAAATGAGACTATCGCCGGTCAACGCTTAATCTGATTGAATATAGGCTTTAGTTTGATTAGAACTCAAACCAGTATTTTTCTTTGTCATGAGATGTTAGCTTATTCCCTTTCCTACTAGTGTTTGATCTaatgcattctgggaaatgtATTCGGATATGTAAAGACGTTAAGGAAATGATTATAGACAACCCACAACACGATCTTAGAGTATTTCACACCACTGCAATTATTTCAAATAGTTTGAAGAGGATGTGCAACTCAATTCAGAATTGACCCCAACTTTGACATTGAGGTATTCATCTCAGGGCAGAAAAgtaaagagaaaaaaaaagttacaagattttttaatttttaatttggGGAGGGAAACTCATTTTATAATGGTTTACATTTTATCCAGAATCAAATACAGAACCAGTGTGGATTAGTTCCAATATCTCACCCTTTATTTGATGCCATTAAACACCATGATCATAGA

Function

NR:

description
leukotriene A-4 hydrolase-like

GO:

id name namespace
GO:0019370 leukotriene biosynthetic process biological_process
GO:0006508 proteolysis biological_process
GO:0004463 leukotriene-A4 hydrolase activity molecular_function
GO:0008237 metallopeptidase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K01254 LTA4H; leukotriene-A4 hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021563458.2 True 3142 mRNA 0.48 18 48775456 48783034

Neighbor

gene id symbol gene type direction distance location
LOC110490204 LOC106576029 coding upstream 7563 48757205 ~ 48767893 (+)
lamtor4 LOC106576032 coding upstream 22690 48750150 ~ 48752766 (+)
LOC110490196 tnpo3 coding upstream 265624 48492575 ~ 48509832 (+)
LOC110490194 calu coding upstream 295579 48470021 ~ 48479877 (+)
LOC110490738 LOC106576023 coding upstream 333582 48433758 ~ 48441874 (+)
LOC110490215 LOC106576040 coding downstream 69545 48852579 ~ 48859532 (+)
LOC110490216 LOC106609152 coding downstream 172036 48955070 ~ 48957811 (+)
LOC118938892 NA coding downstream 210143 48993177 ~ 48993971 (+)
LOC118938811 NA coding downstream 228287 49011321 ~ 49015350 (+)
LOC118938893 NA coding downstream 252958 49035992 ~ 49036786 (+)
G1301285 NA non-coding upstream 7220 48767980 ~ 48768236 (+)
G1301366 NA non-coding upstream 43895 48727392 ~ 48731561 (+)
G1301358 NA non-coding upstream 66072 48709140 ~ 48709384 (+)
G1301357 NA non-coding upstream 66981 48708197 ~ 48708475 (+)
G1301355 NA non-coding upstream 68400 48706722 ~ 48707056 (+)
G1301434 NA non-coding downstream 110504 48893538 ~ 48893741 (+)
G1301439 NA non-coding downstream 115654 48898688 ~ 48898972 (+)
G1301446 NA non-coding downstream 125484 48908518 ~ 48908726 (+)
G1301450 NA non-coding downstream 133962 48916996 ~ 48917271 (+)
G1301461 NA non-coding downstream 152159 48935193 ~ 48935406 (+)
G1301200 NA other upstream 190193 48584707 ~ 48585263 (+)
kiss2 kiss2 other upstream 415017 48359799 ~ 48360553 (+)
G1300598 LOC106575986 other upstream 827564 47946368 ~ 47947892 (+)
G1299894 NA other upstream 1204793 47569830 ~ 47570663 (+)
brd1a LOC106575995 other upstream 2459454 46293582 ~ 46316075 (+)
G1301458 NA other downstream 147012 48930046 ~ 48930588 (+)
G1301706 NA other downstream 612189 49395223 ~ 49396921 (+)
LOC110490228 NA other downstream 615424 49398275 ~ 49410313 (+)
G1303015 NA other downstream 1395240 50178274 ~ 50178565 (+)
G1303095 LOC106609233 other downstream 1518411 50301445 ~ 50302351 (+)

Expression


Co-expression Network