LOC110490203 (LOC106609145)


Basic Information

Item Value
gene id LOC110490203
gene name LOC106609145
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 48784441 ~ 48813048 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036944481.1
GAGGAGTCTGTACTGTTCCCTGACCTTGGATGAGAAAAGTGTTTgggtgtgagagagcgagaaagacagacTTGGGAGAGTTTGGCATCAACATAATGCACATCAAGCTATAAGGAAGGGAGGGGGACAGACCGAGACCATGGGGGCTGCAGTATAGACTACTGCAGTGCAGGTTTGTGGGGTGTTGTTTCTGTGGCTGAAGAGAGATTTGCATTAGGATTCTGAGGGACACCTGGCAACCCGTGGCTGAGCCGAGGAGTGACGATGTCTGTACAGGCCAGAAGACAACACAGCATTCAgcagCCGATGAAAGAGCCCGGAACAGGAAGCTGAGATGGAGTTCTCAGGGTGCCCTGCTGCTGCCGGTGTTGCCGACGAGGCCCAGGAGGCGGAGCAGGCGGAGAAGGAGGGCCACGCCCAGGTTCTATTTGATGAGTTTGTCCAGGCGTCCACCTGCAGAACGACACTCCGTGCCTTCAACCTGCTGTGTGAGCACcttcagctcacacacacacacacacagccacagacaTACCCCCCGACGCAGCCGCAGAGGCCTTTCTACCACACCCTCAAAGAACGCCTCAGCTACTGGAAGGCCAACGCACTGTGGGCCAAACTGGACAAACGGGCGGCCCACCACGAATACGGGAAGGGCCGTGTTTGTGCCAACACAACGTGTGTGATCATTGGGGCGGGGCCATGTGGTCTGCGTACAGCAGTAGAGCTGGGGTTCCTGGGGGCCAGAGTGGTGCTGCTGGAGAAGAGGGATGCCTTCTCCAGGAACAACGTCCTCCACCTCTGGCCTTTCACCATCCATGACCTCAGGGGCCTCGGGGCCAAGAAGTTCTACGGAAAGTTCTGTGCTGGAGCCATTGACCACATCAgtATACGGCAGCTACAGTTGGTGTTATTAAAGGTGGCTCTGTTGTTGGGGGTGGAAGTCCATGTCAACGTAGAGTTCAAGGGACTGGTGGAGCCACCTGCGGACCAGGAACAACAGAagGTAGGCTGGAGGGTGGAGGTGAAACCCAAGTCTCACCCTATTAACACACTGCAGTGTGACGTGGTGATCGGAGCTGATGGACGACGGAACACACTGCCAGGGTTCAGGCGTAAGGAGTTCCGAGGCAAGCTGGCCATTGCTATCACAGCTAACTTCATGAACCGTAACACCACGGCCGAGGCCAAGGTGGAGGAGATCAGTGGAGTGGCCTTCATCTTCAACCAGAGGTTCTTTCAGGAGCTACGGGATGCCACGGGAGTGGACCTGGAGAATATAGTGTACTACAAGGACGACACGCACTACTTTGTGATGACGGCTAAGAAGCAGAGTCTGCTGGAGAAAGGAGTCATTCTGCGGGACAATGCAGACACAGAAACACTTCTCTCACGGGGAAACGTGGACCAGAATGCACTGCTGGCCTATGCCCGCGAGGCGGCGGACTTCTCCACCAATCACCAGCTGCCGTCCCTGGACTTTGCCATGAACCACTACGGGCAGCCTGATGTTGCCTTGTTTGACTTCACCTGTATGTACGCGTCAGAGAACGCTGCACTGgtcagacagagacatggacaccATCTACTGGTCACGCTGGTGGGAGACAGCCTTCTGGAGCCATTCTGGCCCATGGGGACAGGTATAGCACGGGGGTTCCTGGCAGCACTGGATTCTGCCTGGATGGTACGGAGCTGGGCTCAAGGCCTTGCCCCTCTGGACTTACTTGCTGAAAGaGAGAGTCTGTATCGTCTCCTTCCTCAGACCACTCCAGAAAATGTCAACAAAAACTTTGGTCAATACACCGTAGACCCAGCTACCCGCTACCCTAACATCAACCCTCAACTCATCAGCCCCGCACAGGTGGGCCATCTAATATACACAGGAGAGAATGGAGGTTCGGGTGTGGTCCAGGAACCGCAACCCCGATCCCCCTTGCCGAAGCTACTACGACAGGAGTCCTTCTCTCGCTCCAGTAAGCTTTTGTCGTGGTGCCAGCAGCAGACGCAGGGTTACCGTGGCGTTGCTGTTAGCGACCTCACTACATCCTGGAAGAGTGGCCTAGCTTTGTGTGCCGTCATCCACCACTACCGCCCTGACCTCATTGACTTTGCCTCTCTGGGGGAGGATGAGGGGGAGGTGAATATGAGGTTGGGGTTGGAGGTGGCAGAGAAGGAGTTTGGCATCTCTCCTGTGATGACTGTCGAGGAGATGGCGTCTGTCAGTGAAACGGACACTCTCTGTATGGTCATGTACCTCAGCCAGTTTCACCAGCTCTTCAAGGACGCACTGCCCCCAAGTGAATCCCAGACTGAGAGCCCAGATGGGAGGGCTGCTGTGATTGGTcctgcctctctcctcagccGCCTTGGCCACAGCCCATCCCGCAAGCGCAACCCCAAGGAGCAGAAGGAGAAGGATGCGGTGGGGAAGAGGAGAAAGACCAGTCGGCCATGTCTGGAGGACGTGAAACAAGATGTCCGATTAAGATCTCAGGACAGTTATGAGGAAGAGACTGCCCTGTGCTCTGTGGGTGGAGCAAGCCAGAGCAGAGTGCGCTCGATGGCCAATCAGCTGCTGGCCAAGTTTGAGGAGAATGCCCCTTGCCCCTCCTCCACGCCAGCTGCAGCTCTACgcagacagAAATATGTTCAGATGTACACAGGGGGAGTGAGCTCATTGGCTGAACAGATATCCAATCAGCTTCAAAGTCAAGAGTCACCTTCATCCCAGCACACTCCTGATAGGAAGGAAACGgctgccGTTCGCTCTGTGTTGGCAGGGTCAGGAGGGGCCAGTGATGTGTGTTTCTTCTGCAGTAAGCGGGTGTACGTGATGGAGAGACTCAGTGTTGAGGGACTGTTCTTCCACCGGAGCTGCTTCCAGTGTGACCACTGCAGCTCCACCATCCGCCTGGCCTCCTACGCCTACGACCGACCTAACGGGAAGTTTTACTGTAAGCCGCACTATGACGTCCGTCTGGTTGGGCCGGTCCAGAGGAAGAGGGCAGCCCCCCCGACCTCCGATCAGCCCCCAACCCCCTACGAACGGACCCCCTCTCAGCGGACCCTCCTGGAGTCCCAAGCTGCTCTGTCCACTAACCCTCGCTCCTCAGTGACTGTGGTGACAGCAGATCGCAAGTCCTCAGtggcgTCTCTGATTGAGGAGGAGTGTGGCTTGGCTAAGCGCGTGCACGGCACGCCAGAACGTATAGAGCTGGAGAACTACCATGTGAGCCTGGGGAGCCTGGAGACTGAACAGCTAACAGATGAGCCGGAGGAGGTGCCAGAGGAGACGCTGGCCAATTACAACCTCAGTCTGCTGGTGACAGAGGAGAAGAAGGCCAATCACAAGCGCAGCCCGTTGTGGGACAAGAGCAACGAGGGCTCCAGTTCGGAATCAGAgacggaggaggagggggagaggcagcGGGCTCAAACCAATGACCTGGCTAGAGACTCCTGGAGGAAGGCCATGGAACTACACGCACGCCtccgaggagagagaggagacgacgaagaagagacagaagaaggagaggaggaaggagaggttgatgaggaggaggaggagttatcTAGTGATGaggaagGATCATCCCCCCTCACTGCTCAGGAGGTAGCCTCGTTGGACGAGTGGCAGCAGAGCGCACACTCTCAAAACACACACTCTCCAGACACACTCACGCCTGACTCGACAGCACCCGATACACACGGTCCACACAGACCCACCAGTGTACCCAATATCACCTTCTCCACTCCAGCCACTGCCTCAACACCATTCACCCCCTTAACGTCACATGCACCCACATCAATGTCCTCTGTCTCAATTCCAGACTCCTCTGTCTTTACCTACTCCTCCCCTAACTCCTCCACCACATTGGGCTGCTTCCCCGGTCCGGAAGTGGGAGAGGAAgatgggaaagagaaagagaggaaggagagaaaagagcaagaggagagggagagaggggagagggtgcgTGACCCCAGCAGTAGTTCGGGGATCGGTGTGGGCGGGAGCTCCACCACCTCTACCTCGgaccctctcacccctccctgcATCCTTCCCCCCGCCCAGCACAGGGCATGCTGGGATAGCCTGCCCCACCCTGATGTGGAGGCGGAGTCACTGCAGAGCCCCGCCCCTCGCCCTGCCCCTCGATTTGTCCCCGCACCTATCATGGCGTCGGCTGTTGTGCGGGGGGTCGGGGGCAAGAAACTGAATCCGTGGGACATGGGTGGCGGAAGCGGGCCTGCCGCGGGGGGGTCTGTTGGAGCTGGGTCTCTTGGGGAGCAGCTGTGTAAGGGTGAAGTAATAGACCCCTTAGAGGACATCAGCTCCCCCTTGTCCCCCCTGAAGCCCCTTAAGGCAGTGCCCAGAGACGAGAGAGAAAtcgggaggaagagggagatggagaggaggagggagatagagagagcagcCATGGGGGTGGGCTGGGAGGACATGAAAATCACCCTAGGAAGGGAGCCTCTCCCAGGGAAGAGCAGAGGAGGTCTGGACCCCCGCAGACTCACAGAGAGCCtgcctcccctccttctccaggGGGGCTTCATCTTCCCTTCACGTAAGTGCCGCAGGGACAACCAGCCCCCCAGCCAGAGTGTGTCTGAAGCGGGCATAGGAGAGGGTGGACCCCTGGGCCTGTGGAGAGCTGTCATCTCTGGCTATAAGAGGGACAGGAAGAAGAAGGGCAGGACTTCCCTTCCCAATTCAACAACAGCGCCAGCCCCCAAAGAGCAGGGCAGGAGGAAAACTTCTGCAGAGAGacgagGTGTGAAGTTCAGGGAGCGCCAGAGCTGGTCGGAGCCAGAGGAGTCAGACATCACCTGCTCTGTTGTGATGGAGAGATGCTCCATGAACCCCAAGGCCAACaGGCAcgtggggaaagagagggagctgGACAGCTCCCCCCATATGGATACACAGCGGAAGTCATCGTGCCCTACGGAGATGGTGGGGGTACTGGTGCACATGAAGGACCTGAAGGACCCGTCCAGCCTGGATGTGTCAGAGGCCATGTTCCACAGAGACCGAGAcccagaggaggaggagctaGATGCCAGGTTAACACGCAGGGTACAGAGGGCAGCGCGCAAACAGGCCAAACAGGAGCAACTCAAGAGACTGCACAGAGCCCAGATGATCCAAAGGCAGTTGGAGCAGGTGGAGGAGAAGCAGAGGCagctggaggagaggggtgtggcTGTGGAGAAGGCCTTGAGAGGGGAAGCAGACTACTGGGGAGAGTCGAATGACAGTGAAGAGCTGGACTTGCACCTGGGAGtcatgggcaggcaggatgatccaGCTCTGATGCAGCAGTGGTTCAAGCTGGTCCAGCAGAAGAACTGTCTGATGCGCTATGAGTCAGAACTCATGATATTCGCTCGGGAGCTGGAGTTGGAGGATAGACAGAGCCGTCTTCAACAGGAGCTCAGAGAGAGGATGGCCGTGGATGacCATCTGAAGGGTGAGGCAGAGCTGGCTGAGGAGAAGCTAATCCTGGGGGAGATGTTGGAGGTGGTGGAGCAGAGAGATGCTCTGGTGTCTCTGCTGGAGGAGCAGCGGCTGCAGGAGAGCCAGgaggacagagacctggaggCCATCATGCTGTCCCGGGGCCTGGGCCTGCACAACTGGGCCTGAACCTGAAGAACTGGGCCCAAGCACACACGTCACTTCCCCTCTAAAGCTGCGATCAGGGTCACTTCCCCTCTGATACAACGTTATGACCAGGATCAAGGCGGGACAGTGTCTGGATGATCAGTTTTTAGGATTGAAGATGTTTCCCCAATCCCCACTGCTACACACATCTTGCTATACCCCTGACTGACGGGCCTCTGAGATGGATGGCCCTATGCTCACTATACTCACCCAGGCTGTTGTTATGGCGATATGTGGCATGTATGAATGATTTGTATTGTTATTTATTAACcatttagaaaaatgtatattatgtaaaaaaagaaacagcactgatttttttaaaaccttttttaaAATGACATAATGTTTTACTTCACACATTGGATAATAAAGACATTCTGACATCATGA

Function

NR:

description
protein-methionine sulfoxide oxidase mical3a-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036944481.1 True 6081 mRNA 0.56 29 48784441 48813048

Neighbor

gene id symbol gene type direction distance location
dennd6b dennd6b coding downstream 9062 48769815 ~ 48775379 (-)
LOC110490207 LOC106609140 coding downstream 27401 48753512 ~ 48757040 (-)
atp6v1f atp6v1f coding downstream 34336 48748403 ~ 48750105 (-)
zgc:193726 LOC106576030 coding downstream 36757 48744542 ~ 48747684 (-)
LOC118938891 LOC106576028 coding downstream 40001 48742636 ~ 48744440 (-)
svopl svopl coding upstream 936 48813984 ~ 48822770 (-)
si:dkeyp-27e10.3 LOC106576037 coding upstream 9925 48822973 ~ 48839311 (-)
parp12b LOC106576038 coding upstream 26382 48839430 ~ 48851965 (-)
LOC110490212 LOC106576039 coding upstream 45461 48858509 ~ 48890539 (-)
LOC118938809 LOC106576042 coding upstream 156956 48970004 ~ 48976098 (-)
G1301811 NA non-coding downstream 16213 48767959 ~ 48768228 (-)
G1301795 NA non-coding downstream 62051 48722174 ~ 48722390 (-)
G1301785 NA non-coding downstream 80780 48703288 ~ 48703661 (-)
G1301778 NA non-coding downstream 89160 48694989 ~ 48695281 (-)
G1301737 NA non-coding downstream 125828 48636751 ~ 48658613 (-)
G1301877 NA non-coding upstream 93762 48906810 ~ 48907165 (-)
G1301905 NA non-coding upstream 135064 48948112 ~ 48948826 (-)
G1301914 NA non-coding upstream 145984 48959032 ~ 49046066 (-)
G1301947 NA non-coding upstream 239749 49052797 ~ 49053945 (-)
celsr1a LOC106576003 other downstream 1080403 47584674 ~ 47707520 (-)
tbc1d22a tbc1d22a other downstream 1564826 47217532 ~ 47405004 (-)
tafa5a fam19a5 other downstream 1831017 46822067 ~ 46995100 (-)
G1298541 LOC106575995 other downstream 2486489 46295361 ~ 46297952 (-)
G1298177 NA other downstream 2795178 45956059 ~ 45989263 (-)
G1302602 NA other upstream 850903 49663951 ~ 49664296 (-)
LOC110490244 LOC106609225 other upstream 1486416 50290050 ~ 50301082 (-)
LOC110490264 LOC106576080 other upstream 2386181 51199223 ~ 51205927 (-)
LOC110490744 LOC106576129 other upstream 2973583 51785488 ~ 51793354 (-)

Expression


Co-expression Network