LOC118938892


Basic Information

Item Value
gene id LOC118938892
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 48993177 ~ 48993971 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC118938892
ATGGATGACGATTTGAAGATAGGCTTCGACCCCACCGGCAAGCCGGTGATGATGGAAGACCCTGGGAACTCCAGCGACCCGTTTGGCCGGGACGAGGAGGTTGCCAAGATCGAGATCACGGTGCTTAGCGTGACATTCGTCGTGGCTGTGGTGGGTAACCTGAGCGTGCTGCTGGCCATGTACATGATCCGACGGAAGTCCTTGCACATACACCTGTTAATGAAACACCTGAGCCTTGCGGACTTGGTAGTGGCCTTTTTCCAGGTTGCCACAGCTCTGACTTCCTGTGGGCCTGACTTCCTGTGTCGCATCATCAAGTACATGCAGGTGCGAGGGATGTTCGTGTCCACCTACATGTTGGTAATGACGACGCTGGACCACTACATCGCCATATGTCACCCGATGCAGACCCTTCACTAGCCCACGCAGCGCTCCTACTTGATGATCGGGGCCACCTGGGTGTGTAGTCTTGCCCTGAGCATGTCCCAGTATTTTAACTTCTCCCTGAGCGAGGTCCGCCCGGGCTCGGCCGTGTATGACTGCTGGGTACACTTCATCCAGCCGTGGGGTGTGCTCGCCTACATCACCTGGAGCACCGTGGGCATCTTCCTCGTGGCCGTGGCTGTGCTCATGCTCTGCTACAGCTTCATCTGCCGATCAATCTGGCTGAACATAAAGTACTAGACCCAGAAGAGCACGAATGTGATGGCACTTGTGACCAAGAATAGGCTGATCGGGAAGAGTTCAGGCAGCATCGTCAGCACCATCTCGCGTACCGAGCTGCGCACACAGTGA

Function

NR:

description
arg8-vasotocin receptor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC118938892 True 795 mRNA 0.56 1 48993177 48993971

Neighbor

gene id symbol gene type direction distance location
LOC110490216 LOC106609152 coding upstream 35366 48955070 ~ 48957811 (+)
LOC110490215 LOC106576040 coding upstream 133645 48852579 ~ 48859532 (+)
LOC110490205 LOC106576033 coding upstream 210143 48775456 ~ 48783034 (+)
LOC110490204 LOC106576029 coding upstream 225284 48757205 ~ 48767893 (+)
lamtor4 LOC106576032 coding upstream 240411 48750150 ~ 48752766 (+)
LOC118938811 NA coding downstream 17350 49011321 ~ 49015350 (+)
LOC118938893 NA coding downstream 42021 49035992 ~ 49036786 (+)
LOC110490217 LOC106576042 coding downstream 57944 49051915 ~ 49058766 (+)
LOC110490219 LOC100286412 coding downstream 71671 49065642 ~ 49106682 (+)
LOC110490220 LOC106576044 coding downstream 116326 49110297 ~ 49241050 (+)
G1301490 NA non-coding upstream 6129 48982949 ~ 48987048 (+)
G1301489 NA non-coding upstream 11829 48975623 ~ 48981348 (+)
G1301472 NA non-coding upstream 46625 48946353 ~ 48946552 (+)
G1301468 NA non-coding upstream 50072 48942553 ~ 48943105 (+)
G1301462 NA non-coding upstream 56117 48936776 ~ 48937060 (+)
G1301684 NA non-coding downstream 352122 49346093 ~ 49346309 (+)
G1301706 NA non-coding downstream 402455 49395223 ~ 49396921 (+)
G1301708 NA non-coding downstream 403787 49397758 ~ 49398022 (+)
G1301727 NA non-coding downstream 436835 49430806 ~ 49431122 (+)
G1301458 NA other upstream 62589 48930046 ~ 48930588 (+)
G1301200 NA other upstream 407914 48584707 ~ 48585263 (+)
kiss2 kiss2 other upstream 632738 48359799 ~ 48360553 (+)
G1300598 LOC106575986 other upstream 1045285 47946368 ~ 47947892 (+)
G1299894 NA other upstream 1422514 47569830 ~ 47570663 (+)
LOC110490228 NA other downstream 404487 49398275 ~ 49410313 (+)
G1303015 NA other downstream 1184303 50178274 ~ 50178565 (+)
G1303095 LOC106609233 other downstream 1307474 50301445 ~ 50302351 (+)
LOC110490250 LOC106609227 other downstream 1365239 50358439 ~ 50372219 (+)

Expression


Co-expression Network