LOC118938811


Basic Information

Item Value
gene id LOC118938811
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 49011321 ~ 49015350 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005036106.1
gaaggagagaaaagaaacacacacacaggatacttgtATCCGTAACATCCACAATCGGGATGCCATAGTTAAAGGCTTCCTGCAGCCACTGCCTCACAATGCAGGCATCACAGTGATTGACGGCAGCCCTTTTCCAATCCAGTTTTTTACTGTTTTAAAGATCACTCATTTTATTTGCCTTCCTTGCCCTGTTGAATAACCTTTTTTGTTAATGTATTCTGATGAGGTTTTTATTTAGCTCGTATTCTGCCTGTAGAGATACTGCAAATTTTGGCTTGTGTCCACAACAGGCAACTAGGGTTTGTCCTGGCAGGTCTGTTAGACTTATAACCATGAGTGGTCATTCGAAATTGGCATTGCCAGAGCTCCATTGTGAGAACTGCAAGGAGACTGGTACAGCAGGCATGAAAGACCTGCAAAGGAGTGGCTATTGACCTGCCGCTGTCTTCTCAACAGACGTGATCTCTTCATATGAAGAGCTGAACATGGCATGCCACATCAAGCATTTTTGACAATGCTTGACCAGAGGACAGTGCGTTTTGGCAGAGTCAGTTGGGATAGGCAGACTGATGTCTCTCCAGACCACACGGCTCTCTTCATCAAATCGGATCTTATACCCATCCCTGGCAATAAATAATTATGTTTTTAGTCGC

Function

NR:

description
PREDICTED: uncharacterized protein LOC107695438

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005036106.1 True 653 mRNA 0.44 3 49011321 49015350

Neighbor

gene id symbol gene type direction distance location
LOC118938892 NA coding upstream 17350 48993177 ~ 48993971 (+)
LOC110490216 LOC106609152 coding upstream 53510 48955070 ~ 48957811 (+)
LOC110490215 LOC106576040 coding upstream 151789 48852579 ~ 48859532 (+)
LOC110490205 LOC106576033 coding upstream 228287 48775456 ~ 48783034 (+)
LOC110490204 LOC106576029 coding upstream 243428 48757205 ~ 48767893 (+)
LOC118938893 NA coding downstream 20642 49035992 ~ 49036786 (+)
LOC110490217 LOC106576042 coding downstream 36565 49051915 ~ 49058766 (+)
LOC110490219 LOC100286412 coding downstream 50292 49065642 ~ 49106682 (+)
LOC110490220 LOC106576044 coding downstream 94947 49110297 ~ 49241050 (+)
LOC110490226 ifrd1 coding downstream 367883 49383233 ~ 49394324 (+)
G1301490 NA non-coding upstream 24273 48982949 ~ 48987048 (+)
G1301489 NA non-coding upstream 29973 48975623 ~ 48981348 (+)
G1301472 NA non-coding upstream 64769 48946353 ~ 48946552 (+)
G1301468 NA non-coding upstream 68216 48942553 ~ 48943105 (+)
G1301462 NA non-coding upstream 74261 48936776 ~ 48937060 (+)
G1301684 NA non-coding downstream 330743 49346093 ~ 49346309 (+)
G1301706 NA non-coding downstream 381076 49395223 ~ 49396921 (+)
G1301708 NA non-coding downstream 382408 49397758 ~ 49398022 (+)
G1301727 NA non-coding downstream 415456 49430806 ~ 49431122 (+)
G1301458 NA other upstream 80733 48930046 ~ 48930588 (+)
G1301200 NA other upstream 426058 48584707 ~ 48585263 (+)
kiss2 kiss2 other upstream 650882 48359799 ~ 48360553 (+)
G1300598 LOC106575986 other upstream 1063429 47946368 ~ 47947892 (+)
G1299894 NA other upstream 1440658 47569830 ~ 47570663 (+)
LOC110490228 NA other downstream 383108 49398275 ~ 49410313 (+)
G1303015 NA other downstream 1162924 50178274 ~ 50178565 (+)
G1303095 LOC106609233 other downstream 1286095 50301445 ~ 50302351 (+)
LOC110490250 LOC106609227 other downstream 1343860 50358439 ~ 50372219 (+)

Expression


Co-expression Network