LOC118938893


Basic Information

Item Value
gene id LOC118938893
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 49035992 ~ 49036786 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC118938893
ATGGATGACGATTTGAAGATAGGCTTCGACCCCACCGGCAAGCCGGTGATGATGGAAGACCCTGGGAACTCCAGCGACCCGTTTGGCCGGGACGAGGAGGTTGCCAAGATCGAGATCACGGTGCTTAGCGTGACATTCGTCGTGGCTGTGGTGGGTAACCTGAGCGTGCTGCTGGCCATGTACATGATCCGACGGAAGTCCTTGCACATACACCTGTTAATGAAACACCTGAGCCTCGCGGACTTGGTAGTGGCCTTTTTCCAGGTTGCCACAGCTCTGACTTCCTGTGGGCCTGACTTCCTGTGTCGCATCATCAAGTACATGCAGGTGCGAGGGATGTTCGTGTCCACCTACATGTTGGTAATGACGACGCTGGACCACTACATCGCCATATGTCACCCGATGCAGACCCTTCACTAGCCCACGCAGCGCTCCTACTTGATGATCGGGGCCACCTGGGTGTGTAGTCTTGCCCTGAGCATGTCCCAGTATTTTAACTTCTCCCTGAGCGAGGTCCGCCCGGGCTCGGCCGTGTATGACTGCTGGGTACACTTCATCCAGCCGTGGGGTGTGCTCGCCTACATCACCTGGAGCACCGTGGGCATCTTCCTCGTGGCCGTGGCTGTGCTCATGCTCTGCTACAGCTTCATCTGCCGATCAATCTGGCTGAACATAAAGTACTAGACCCAGAAGAGCACGATTGTGATGGCACTTGTGACCAAGAATAGGCTGATCGGGAAGAGTTCAGGCAGCATCGTCAGCACCATCTCGCGTACCGAGCTGCGCACACAGTGA

Function

NR:

description
arg8-vasotocin receptor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC118938893 True 795 mRNA 0.56 1 49035992 49036786

Neighbor

gene id symbol gene type direction distance location
LOC118938811 NA coding upstream 20642 49011321 ~ 49015350 (+)
LOC118938892 NA coding upstream 42021 48993177 ~ 48993971 (+)
LOC110490216 LOC106609152 coding upstream 78181 48955070 ~ 48957811 (+)
LOC110490215 LOC106576040 coding upstream 176460 48852579 ~ 48859532 (+)
LOC110490205 LOC106576033 coding upstream 252958 48775456 ~ 48783034 (+)
LOC110490217 LOC106576042 coding downstream 15129 49051915 ~ 49058766 (+)
LOC110490219 LOC100286412 coding downstream 28856 49065642 ~ 49106682 (+)
LOC110490220 LOC106576044 coding downstream 73511 49110297 ~ 49241050 (+)
LOC110490226 ifrd1 coding downstream 346447 49383233 ~ 49394324 (+)
LOC110490228 NA coding downstream 361489 49398275 ~ 49410313 (+)
G1301490 NA non-coding upstream 48944 48982949 ~ 48987048 (+)
G1301489 NA non-coding upstream 54644 48975623 ~ 48981348 (+)
G1301472 NA non-coding upstream 89440 48946353 ~ 48946552 (+)
G1301468 NA non-coding upstream 92887 48942553 ~ 48943105 (+)
G1301462 NA non-coding upstream 98932 48936776 ~ 48937060 (+)
G1301684 NA non-coding downstream 309307 49346093 ~ 49346309 (+)
G1301706 NA non-coding downstream 359640 49395223 ~ 49396921 (+)
G1301708 NA non-coding downstream 360972 49397758 ~ 49398022 (+)
G1301727 NA non-coding downstream 394020 49430806 ~ 49431122 (+)
G1301458 NA other upstream 105404 48930046 ~ 48930588 (+)
G1301200 NA other upstream 450729 48584707 ~ 48585263 (+)
kiss2 kiss2 other upstream 675553 48359799 ~ 48360553 (+)
G1300598 LOC106575986 other upstream 1088100 47946368 ~ 47947892 (+)
G1299894 NA other upstream 1465329 47569830 ~ 47570663 (+)
G1303015 NA other downstream 1141488 50178274 ~ 50178565 (+)
G1303095 LOC106609233 other downstream 1264659 50301445 ~ 50302351 (+)
LOC110490250 LOC106609227 other downstream 1322424 50358439 ~ 50372219 (+)

Expression


Co-expression Network