LOC110490225


Basic Information

Item Value
gene id LOC110490225
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048579.1
NCBI id CM023233.2
chromosome length 81569517
location 49372284 ~ 49375843 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005036107.1
actaggctataCTAACCGCACCAACTGTGCTATTTGTGGCGTCAATTGAGAaaatagtatgcttattggtcatagtatggatatagttccCGGATGTTGTACTAAATTTGCCAAAATATGAAGTATACACATCGAGGACACCGTTTACGTACTTTAAGGCCCATAATGCAATTGTTCCGGAAATGGGCGTGGCTCagtgttttcagatttgaagaacaTGGCGcaaaatatgcagccgaagtaCACATAATTATGACACattttaagaaaatgttgagcaatgtaatacagtaattacttttcaaataagttaccttacacgttatgttggctgacaatttgttagctacgctgtccttatCATTACAGCATGTACCGGTATGCTAGTTGGCtacttatacatcaaacttgccagtatattaactataggctatctaactaCCCGTGTCATaggtttattgacttgattattcccgtCATTCTTTGTTCAGCTAAATGTTATAGTCGTTTTGCGTTCTCAATGGATATTCGGGTGCTtttgtaaattcgctctggctatctactctgatttcgcCTGAGTAATGTTATACCTCAGAGCAGAGTGCAGAATAATGactttacgaacgctcaacaccggTTGAATATGGTCGGTGTCAGTAAACCTCGGCAAAAAAAAAGCgttattaaattgttgccagcagcacatttagtcaccaacgctctggataacatgacaactgcctaaccagctgtgctaggGTCCTGAAGGACGCCTCACTGTCCTCAGCTGTTTGGCTTCTATGAGAGGACCATCTCTACCAGCACTCATGGGTCACCCAAGGCCCAAATCGCCATGACTTGATAGGTGACCAGTCGCCTGTAAGCGGTGGACAGCCTCCCTATGAGCCGGGTGCTGGGCTTCGGAGCCAAATACCTGCAGGATCACTTCTCTTCCTGGGCCAGACAGCAGCGTGGATATGAGGAAGCTTTtgtgaatgatgatgatgaggaggaagtCGACTGAGCCAGAGGGATTTTCCCCCATTCTATACCCCCATTGTCTTCTTCCCGGTTATCCACTCTTTTCCCAAAGTATGCACTTGTGCATTTTCTGTCATGGATCAGAATTTGATATGTGTAATTATTGGCTAAAGGGAGTTTCCACCATTGTTAAATCTATGACGGGAAAGGTGGATAATTGGGATCTAGCTctctaaccctagccctaacccctagAGAAGTTTCAACTCAGGGTAATGTATTTCTATTATTGCATGCCCAATTAAACATAGCTTTTGCACAAAGAAACATGTACATAGAAATATAGATGACTGTCTTCCAGAGCCATATGATATGAGGGAAACTGTTCATCTCAAGCCCCATTCCATCTTATGAATTATAAATGTATATGATATAAGAATGTATATGAAAGTACAGTATTCAGGTGTTTTTGTTAAAATATTTTAATTGGGACTATAGGAATGTAAAAAAATAGACAAATCTGTTGAATGAAACATTTACTTGTATTTTACATTCTATTTAGTTATTTACTTTTTTTATTGTAAGAATAATGATGATGAgactgatcagtttcacctgtccttgtgcttgtctcctcccccctccaggtgtcgcccatcttccctattatcacctgtgttctctgtcttgtttgttgccagtttgtcttgtttgttcaagcttACCAACGGTTTTCCTGTCAACGCCTACTGTTTCCAAGCCTTGCTTTGCTAgtccctcctggttttgaccgaTGCCTGACCCTGCCTccacctttgctccacctctggattactgaaccctgcctgaccctgagtctgcctgccgtcctgtaccgttGCCTAACCCTTGATTTTTGACCCCttcctgccttgacctgtctttgcctgcccctgtttgcTACAATAAACAGGGTTACTTGATTCTTGAAAAGGCTATACTGTCAGATCCAAATACTGTTTACATAAAGCAACATTACCAAAGATGTCAACATTGCAGACCTCCAGGACGTCTTCAGTTGATCCAGAAATGGAACCACTATATGGTTAAATCATGACTGGACCAAAGACTTGGGCAGCTACTGTAGCCTACGTATACTGTATGGAAGTGCTATATGGTCAAACAGTAATACTGTGTGCTGAACCTATGCATTGGAATATCTACCTTGTTTAATAAGAACAATTAAACAAATTCCATGTTATGATTATAGTGTTCAATGTTAACACTGATTTAGACAGCTTTGTGACTGCTTGATTTGTTATTAATTTTTTGAATACAAATAGATCtactgggctcctgagtggtgcagaggtctaaggcactgcatctcagtgctagaggagtcactacagaccctggattcgaatccaggctgtttcacaactggctgtgattgggagtccgcacaattggcccagcatcatccgggtatggccggtgtaggccgtcattgtaaataagaatttgtccttaactgacttgcctagttaaataaataaaaaatacttt
>XR_005036108.1
actaggctataCTAACCGCACCAACTGTGCTATTTGTGGCGTCAATTGAGAaaatagtatgcttattggtcatagtatggatatagttccCGGATGTTGTACTAAATTTGCCAAAATATGAAGTATACACATCGAGGACACCGTTTACGTACTTTAAGGCCCATAATGCAATTGTTCCGGAAATGGGCGTGGCTCagtgttttcagatttgaagaacaTGGCGcaaaatatgcagccgaagtaCACATAATTATGACACattttaagaaaatgttgagcaatgtaatacagtaattacttttcaaataagttaccttacacgttatgttggctgacaatttgttagctacgctgtccttatCATTACAGCATGTACCGGTATGCTAGTTGGCtacttatacatcaaacttgccagtatattaactataggctatctaactaCCCGTGTCATaggtttattgacttgattattcccgtCATTCTTTGTTCAGCTAAATGTTATAGTCGTTTTGCGTTCTCAATGGATATTCGGGTGCTtttgtaaattcgctctggctatctactctgatttcgcCTGAGTAATGTTATACCTCAGAGCAGAGTGCAGAATAATGactttacgaacgctcaacaccggTTGAATATGGTCGGTGTCAGTAAACCTCGGCAAAAAAAAAGCgttattaaattgttgccagcagcacatttagtcaccaacgctctggataacatgacaactgcctaaccagctgtgctaggGTCCTGAAGGACGCCTCACTGTCCTCAGCTGTTTGGCTTCTATGAGAGGACCATCTCTACCAGCACTCATGGGTCACCCAAGGCCCAAATCGCCATGACTTGATAGGTGACCAGTCGCCTGTAAGCGGTGGACAGCCTCCCTATGAGCCGGGTGCTGGGCTTCGGAGCCAAATACCTGCAGGATCACTTCTCTTCCTGGGCCAGACAGCAGCGTGGATATGAGGAAGCTTTtgtgaatgatgatgatgaggaggaagtCGACTGAGCCAGAGGGATTTTCCCCCATTCTATACCCCCATTGTCTTCTTCCCGGTTATCCACTCTTTTCCCAAAgtgtcgcccatcttccctattatcacctgtgttctctgtcttgtttgttgccagtttgtcttgtttgttcaagcttACCAACGGTTTTCCTGTCAACGCCTACTGTTTCCAAGCCTTGCTTTGCTAgtccctcctggttttgaccgaTGCCTGACCCTGCCTccacctttgctccacctctggattactgaaccctgcctgaccctgagtctgcctgccgtcctgtaccgttGCCTAACCCTTGATTTTTGACCCCttcctgccttgacctgtctttgcctgcccctgtttgcTACAATAAACAGGGTTACTTGATTCTTGAAAAGGCTATACTGTCAGATCCAAATACTGTTTACATAAAGCAACATTACCAAAGATGTCAACATTGCAGACCTCCAGGACGTCTTCAGTTGATCCAGAAATGGAACCACTATATGGTTAAATCATGACTGGACCAAAGACTTGGGCAGCTACTGTAGCCTACGTATACTGTATGGAAGTGCTATATGGTCAAACAGTAATACTGTGTGCTGAACCTATGCATTGGAATATCTACCTTGTTTAATAAGAACAATTAAACAAATTCCATGTTATGATTATAGTGTTCAATGTTAACACTGATTTAGACAGCTTTGTGACTGCTTGATTTGTTATTAATTTTTTGAATACAAATAGATCtactgggctcctgagtggtgcagaggtctaaggcactgcatctcagtgctagaggagtcactacagaccctggattcgaatccaggctgtttcacaactggctgtgattgggagtccgcacaattggcccagcatcatccgggtatggccggtgtaggccgtcattgtaaataagaatttgtccttaactgacttgcctagttaaataaataaaaaatacttt

Function

NR:

description
apoptosis facilitator Bcl-2-like protein 14

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005036107.1 False 2529 mRNA 0.41 4 49372284 49375843
XR_005036108.1 True 1993 mRNA 0.44 5 49372284 49375843

Neighbor

gene id symbol gene type direction distance location
LOC110490224 LOC106609251 coding downstream 358 49315673 ~ 49371926 (-)
LOC110490222 LOC106576046 coding downstream 66589 49264705 ~ 49305695 (-)
LOC110490221 timp3 coding downstream 176612 49177182 ~ 49195672 (-)
LOC118938810 LOC106576042 coding downstream 353441 49013740 ~ 49018843 (-)
LOC118938809 LOC106576042 coding downstream 396186 48970004 ~ 48976098 (-)
LOC110490847 LOC106576105 coding upstream 68766 49444609 ~ 49446782 (-)
LOC110490229 LOC106576106 coding upstream 110473 49486316 ~ 49488678 (-)
LOC110490230 LOC106609249 coding upstream 120818 49496661 ~ 49513418 (-)
LOC110490232 LOC106576049 coding upstream 233375 49608361 ~ 49612631 (-)
LOC118938922 NA coding upstream 238093 49613936 ~ 49614562 (-)
G1302151 NA non-coding downstream 12700 49359377 ~ 49359584 (-)
G1302146 NA non-coding downstream 21250 49350806 ~ 49351034 (-)
G1301947 NA non-coding downstream 318339 49052797 ~ 49053945 (-)
G1301914 NA non-coding downstream 326218 48959032 ~ 49046066 (-)
G1301905 NA non-coding downstream 423458 48948112 ~ 48948826 (-)
G1302159 NA non-coding upstream 128 49375971 ~ 49377619 (-)
G1302166 NA non-coding upstream 6823 49382666 ~ 49382935 (-)
G1302178 NA non-coding upstream 39090 49414933 ~ 49415300 (-)
G1302181 NA non-coding upstream 40576 49416419 ~ 49416658 (-)
G1302191 NA non-coding upstream 60819 49436662 ~ 49436864 (-)
si:dkeyp-27e10.3 LOC106576037 other downstream 533133 48822973 ~ 48839311 (-)
celsr1a LOC106576003 other downstream 1668246 47584674 ~ 47707520 (-)
tbc1d22a tbc1d22a other downstream 2152669 47217532 ~ 47405004 (-)
tafa5a fam19a5 other downstream 2418860 46822067 ~ 46995100 (-)
G1298541 LOC106575995 other downstream 3074332 46295361 ~ 46297952 (-)
G1302602 NA other upstream 288108 49663951 ~ 49664296 (-)
LOC110490244 LOC106609225 other upstream 923621 50290050 ~ 50301082 (-)
LOC110490264 LOC106576080 other upstream 1823386 51199223 ~ 51205927 (-)
LOC110490744 LOC106576129 other upstream 2410788 51785488 ~ 51793354 (-)
G1304896 LOC107662719 other upstream 2545652 51921495 ~ 51922528 (-)

Expression


Co-expression Network