Item | Value |
---|---|
gene id | LOC110490229 |
gene name | LOC106576106 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048579.1 |
NCBI id | CM023233.2 |
chromosome length | 81569517 |
location | 49486316 ~ 49488678 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
galactose-specific lectin nattectin-like |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_021563498.1 | True | 909 | mRNA | 0.45 | 7 | 49486316 | 49488678 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110490847 | LOC106576105 | coding | downstream | 39534 | 49444609 ~ 49446782 (-) |
LOC110490225 | NA | coding | downstream | 110473 | 49372284 ~ 49375843 (-) |
LOC110490224 | LOC106609251 | coding | downstream | 114390 | 49315673 ~ 49371926 (-) |
LOC110490222 | LOC106576046 | coding | downstream | 180621 | 49264705 ~ 49305695 (-) |
LOC110490221 | timp3 | coding | downstream | 290644 | 49177182 ~ 49195672 (-) |
LOC110490230 | LOC106609249 | coding | upstream | 7983 | 49496661 ~ 49513418 (-) |
LOC110490232 | LOC106576049 | coding | upstream | 120540 | 49608361 ~ 49612631 (-) |
LOC118938922 | NA | coding | upstream | 125258 | 49613936 ~ 49614562 (-) |
LOC118938812 | LOC106576050 | coding | upstream | 182656 | 49671334 ~ 49682202 (-) |
LOC110490235 | LOC106576052 | coding | upstream | 615658 | 50104336 ~ 50144944 (-) |
G1302191 | NA | non-coding | downstream | 49452 | 49436662 ~ 49436864 (-) |
G1302181 | NA | non-coding | downstream | 69658 | 49416419 ~ 49416658 (-) |
G1302178 | NA | non-coding | downstream | 71016 | 49414933 ~ 49415300 (-) |
G1302166 | NA | non-coding | downstream | 103381 | 49382666 ~ 49382935 (-) |
G1302159 | NA | non-coding | downstream | 108697 | 49375971 ~ 49377619 (-) |
G1302313 | NA | non-coding | upstream | 51570 | 49540248 ~ 49540456 (-) |
G1302362 | NA | non-coding | upstream | 99119 | 49587797 ~ 49588005 (-) |
G1302380 | NA | non-coding | upstream | 111644 | 49600322 ~ 49600907 (-) |
G1302564 | NA | non-coding | upstream | 112955 | 49601633 ~ 49601838 (-) |
G1302570 | NA | non-coding | upstream | 118117 | 49606795 ~ 49607186 (-) |
si:dkeyp-27e10.3 | LOC106576037 | other | downstream | 647165 | 48822973 ~ 48839311 (-) |
celsr1a | LOC106576003 | other | downstream | 1782278 | 47584674 ~ 47707520 (-) |
tbc1d22a | tbc1d22a | other | downstream | 2266701 | 47217532 ~ 47405004 (-) |
tafa5a | fam19a5 | other | downstream | 2532892 | 46822067 ~ 46995100 (-) |
G1298541 | LOC106575995 | other | downstream | 3188364 | 46295361 ~ 46297952 (-) |
G1302602 | NA | other | upstream | 175273 | 49663951 ~ 49664296 (-) |
LOC110490244 | LOC106609225 | other | upstream | 810786 | 50290050 ~ 50301082 (-) |
LOC110490264 | LOC106576080 | other | upstream | 1710551 | 51199223 ~ 51205927 (-) |
LOC110490744 | LOC106576129 | other | upstream | 2297953 | 51785488 ~ 51793354 (-) |
G1304896 | LOC107662719 | other | upstream | 2432817 | 51921495 ~ 51922528 (-) |