Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110490230 |
| gene name | LOC106609249 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048579.1 |
| NCBI id | CM023233.2 |
| chromosome length | 81569517 |
| location | 49496661 ~ 49513418 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| transmembrane protein 168-A-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC110490230 | True | 2485 | mRNA | 0.58 | 4 | 49496661 | 49513418 |
49,484,000
49,486,000
49,488,000
49,490,000
49,492,000
49,494,000
49,496,000
49,498,000
49,500,000
49,502,000
49,502,000
49,504,000
49,506,000
49,508,000
49,510,000
49,512,000
49,514,000
49,516,000
49,518,000
49,520,000
NC_048579.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110490229 | LOC106576106 | coding | downstream | 7983 | 49486316 ~ 49488678 (-) |
| LOC110490847 | LOC106576105 | coding | downstream | 49879 | 49444609 ~ 49446782 (-) |
| LOC110490225 | NA | coding | downstream | 120818 | 49372284 ~ 49375843 (-) |
| LOC110490224 | LOC106609251 | coding | downstream | 124735 | 49315673 ~ 49371926 (-) |
| LOC110490222 | LOC106576046 | coding | downstream | 190966 | 49264705 ~ 49305695 (-) |
| LOC110490232 | LOC106576049 | coding | upstream | 95800 | 49608361 ~ 49612631 (-) |
| LOC118938922 | NA | coding | upstream | 100518 | 49613936 ~ 49614562 (-) |
| LOC118938812 | LOC106576050 | coding | upstream | 157916 | 49671334 ~ 49682202 (-) |
| LOC110490235 | LOC106576052 | coding | upstream | 590918 | 50104336 ~ 50144944 (-) |
| LOC110490237 | LOC106609239 | coding | upstream | 656851 | 50170269 ~ 50175057 (-) |
| G1302191 | NA | non-coding | downstream | 59797 | 49436662 ~ 49436864 (-) |
| G1302181 | NA | non-coding | downstream | 80003 | 49416419 ~ 49416658 (-) |
| G1302178 | NA | non-coding | downstream | 81361 | 49414933 ~ 49415300 (-) |
| G1302166 | NA | non-coding | downstream | 113726 | 49382666 ~ 49382935 (-) |
| G1302159 | NA | non-coding | downstream | 119042 | 49375971 ~ 49377619 (-) |
| G1302313 | NA | non-coding | upstream | 26830 | 49540248 ~ 49540456 (-) |
| G1302362 | NA | non-coding | upstream | 74379 | 49587797 ~ 49588005 (-) |
| G1302380 | NA | non-coding | upstream | 86904 | 49600322 ~ 49600907 (-) |
| G1302564 | NA | non-coding | upstream | 88215 | 49601633 ~ 49601838 (-) |
| G1302570 | NA | non-coding | upstream | 93377 | 49606795 ~ 49607186 (-) |
| si:dkeyp-27e10.3 | LOC106576037 | other | downstream | 657510 | 48822973 ~ 48839311 (-) |
| celsr1a | LOC106576003 | other | downstream | 1792623 | 47584674 ~ 47707520 (-) |
| tbc1d22a | tbc1d22a | other | downstream | 2277046 | 47217532 ~ 47405004 (-) |
| tafa5a | fam19a5 | other | downstream | 2543237 | 46822067 ~ 46995100 (-) |
| G1298541 | LOC106575995 | other | downstream | 3198709 | 46295361 ~ 46297952 (-) |
| G1302602 | NA | other | upstream | 150533 | 49663951 ~ 49664296 (-) |
| LOC110490244 | LOC106609225 | other | upstream | 786046 | 50290050 ~ 50301082 (-) |
| LOC110490264 | LOC106576080 | other | upstream | 1685811 | 51199223 ~ 51205927 (-) |
| LOC110490744 | LOC106576129 | other | upstream | 2273213 | 51785488 ~ 51793354 (-) |
| G1304896 | LOC107662719 | other | upstream | 2408077 | 51921495 ~ 51922528 (-) |
